Difference between revisions of "Task Force Document Library"

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The Global Genome Biodiversity Network in collaboration with the European, Middle Eastern and African Society for Biopreservation and Biobanking (ESBB) are developing a knowledge exchange platform for biobanks, researchers and institutions through an online document library. This resource will allow GGBN members and collaborators to perform full text searches, tag publications, and browse information in the following resource categories relevant to biodiversity biobanking: best practice, biobank governance, information and data management systems, standards for sharing samples, business models for biobanks, education and training tools, health and safety, regulation and legislation, research protocols, and curation protocols. A prototype of this platform was launched in July 2016 and is currently being tested by the community for development. Content gaps are being identified and additional use cases are being developed for testing. A prototype of this platform is available under https://library.ggbn.org/ To gain access or if you have any questions please send an email to [mailto:library@ggbn.org library@ggbn.org].
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=Program of Work=
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*Develop and strategically expand the GGBN Document Library for biodiversity biobanking
  
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'''The guide on how to use the GGBN Document Library can be found at: https://library.ggbn.org/share/s/5ptKXCYAR6OwII0mcoGjLQ'''
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=Current Activities=
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*Expand document library functionality, including platform upgrades, streamlining, cleaning (merging and removing redundancies) and updating tags and sub-categories
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*Partner with [https://www.cryoarks.org/ CryoArks], [https://esbb.org/ ESBB] and other GGBN partners to expand document library content
  
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'''Technology:'''
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=Accomplishments=
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We are using Alfresco, an open source document management system which allows full text search, tagging, and versioning.
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*As of April 2020, the GGBN Document Library has over 550 documents.
  
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'''Mission:'''
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=Related Resources=
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Development and expansion of an online knowledge exchange platform specific to biodiversity biobanking
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==GGBN Document Library Users==
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*Request a login: e-mail '''library@ggbn.org'''  
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*Login page: https://library.ggbn.org/share/page/
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*[https://library.ggbn.org/share/s/5ptKXCYAR6OwII0mcoGjLQ General User Guide]
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*Suggest resources/submit feedback: email '''library@ggbn.org'''  
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==Task Force Members==
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*[https://library.ggbn.org/share/s/Ks9uiwEqTouG-EFoXx3ntQ Category Managers Guide]
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*Login to [https://library.ggbn.org/share/page/ Task Force site]
  
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=Getting Involved=
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Email us at '''library@ggbn.info''' to:
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*Obtain a login for the Document Library
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*Join the Task Force and help curate a specific tag or category
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*Suggest additional resources for addition to the Document Library
  
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'''Goals'''
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=Current Members/Category and Network Tag Managers=
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Develop and strategically expand the GGBN Document Library
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==Category Managers==
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Raise awareness of ABS and the importance of genomic collections
 
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'''Current Activities'''
 
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Implement new GGBN tagging system
 
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Continue to expand document library functionality
 
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Partner with CryoArks, ESBB and other GGBN partners to expand document library content
 
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'''GGBN Document Library Category Managers:'''
 
 
*Biobank Management (including Governance, Business Models, Health and Safety)
 
*Biobank Management (including Governance, Business Models, Health and Safety)
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**Jeremy deWaard, Centre for Biodiveristy Genomics, University of Guelph
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**Jeremy deWaard, Centre for Biodiversity Genomics, University of Guelph
 
*Curation Protocols (including specimen and sample field collection, sample preparation, shipping, laboratory curation and storage methods)
 
*Curation Protocols (including specimen and sample field collection, sample preparation, shipping, laboratory curation and storage methods)
 
**Animals: Breda Zimkus, Museum of Comparative Zoology, Harvard
 
**Animals: Breda Zimkus, Museum of Comparative Zoology, Harvard
 
**Plants: Tim Fulcher, Royal Botanic Gardens Kew
 
**Plants: Tim Fulcher, Royal Botanic Gardens Kew
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**Microorganisms: TBD, library@ggbn.org
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**Microorganisms: '''library@ggbn.org'''
 
*Education and Training Tools (including workshop documents and publications, interactive session protocols and technology)
 
*Education and Training Tools (including workshop documents and publications, interactive session protocols and technology)
 
**Heather Prestridge, Texas A&M
 
**Heather Prestridge, Texas A&M
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**Gabi Droege, Berlin Botanic Garden
 
**Gabi Droege, Berlin Botanic Garden
 
*Regulation and Legislation:
 
*Regulation and Legislation:
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**ABS: Documents and publications regarding access to genetic resources and benefit sharing (ABS), including examples/templates for Permits/PIC/MAT/MTA/How To publications/case studies across the globe):  
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**ABS: Documents and publications regarding access to genetic resources and benefit sharing (ABS), including examples/templates for Permits/PIC/MAT/MTA/How To publications/case studies across the globe): '''library@ggbn.org'''
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***TBD, library@ggbn.org  
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**Non-ABS: '''library@ggbn.org'''
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**Other: including CITES/ Shipping e.g. IATA regulations: Commercial Invoice/Shipping Inventory/Import-Export documentation /Other regulations and tools* (*full list TBD):
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**Shipping Regulations: '''library@ggbn.org'''
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***Jane Collins, KU-Leuven University
 
 
*Research Protocols (including laboratory specimen and sample analysis: e.g. species-specific extraction, amplification, sequencing for fresh and archival/ancient material)
 
*Research Protocols (including laboratory specimen and sample analysis: e.g. species-specific extraction, amplification, sequencing for fresh and archival/ancient material)
 
**Laura Forrest, Royal Botanic Garden Edinburgh
 
**Laura Forrest, Royal Botanic Garden Edinburgh
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*CryoArks Content (animal biobanking for conservation research)
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==Network Tag Managers==
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*[https://www.cryoarks.org/ CryoArks] Content (animal biobanking for conservation research)
 
**Kirsty Lloyd, Natural History Museum London
 
**Kirsty Lloyd, Natural History Museum London
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*[https://www.darwintreeoflife.org/ Darwin Tree of Life] Content
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**Heather Allen, Natural History Museum London
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*[https://esbb.org/ ESBB] Content
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**To be decided

Revision as of 16:28, 25 June 2020

Program of Work

  • Develop and strategically expand the GGBN Document Library for biodiversity biobanking

Current Activities

  • Expand document library functionality, including platform upgrades, streamlining, cleaning (merging and removing redundancies) and updating tags and sub-categories
  • Partner with CryoArks, ESBB and other GGBN partners to expand document library content

Accomplishments

  • As of April 2020, the GGBN Document Library has over 550 documents.

Related Resources

GGBN Document Library Users

Task Force Members

Getting Involved

Email us at library@ggbn.info to:

  • Obtain a login for the Document Library
  • Join the Task Force and help curate a specific tag or category
  • Suggest additional resources for addition to the Document Library

Current Members/Category and Network Tag Managers

Category Managers

  • Biobank Management (including Governance, Business Models, Health and Safety)
    • Jeremy deWaard, Centre for Biodiversity Genomics, University of Guelph
  • Curation Protocols (including specimen and sample field collection, sample preparation, shipping, laboratory curation and storage methods)
    • Animals: Breda Zimkus, Museum of Comparative Zoology, Harvard
    • Plants: Tim Fulcher, Royal Botanic Gardens Kew
    • Microorganisms: library@ggbn.org
  • Education and Training Tools (including workshop documents and publications, interactive session protocols and technology)
    • Heather Prestridge, Texas A&M
  • GGBN Conferences (Conference documents archive)
    • Katie Barker, National Museum of Natural History, Smithsonian Institution
    • Alysha Chadderdon, National Museum of Natural History, Smithsonian Institution
    • Gabi Droege, Berlin Botanic Garden
  • GGBN Information (GGBN-specific information and GGBN-produced materials)
    • Katie Barker, National Museum of Natural History, Smithsonian Institution
    • Alysha Chadderdon, National Museum of Natural History, Smithsonian Institution
    • Gabi Droege, Berlin Botanic Garden
  • Information and Data Management Systems (Data standards, data workflows, pipelines, portals, database interoperability)
    • Muriel Rabone, Natural History Museum London
    • Gabi Droege, Berlin Botanic Garden
  • Regulation and Legislation:
    • ABS: Documents and publications regarding access to genetic resources and benefit sharing (ABS), including examples/templates for Permits/PIC/MAT/MTA/How To publications/case studies across the globe): library@ggbn.org
    • Non-ABS: library@ggbn.org
    • Shipping Regulations: library@ggbn.org
  • Research Protocols (including laboratory specimen and sample analysis: e.g. species-specific extraction, amplification, sequencing for fresh and archival/ancient material)
    • Laura Forrest, Royal Botanic Garden Edinburgh

Network Tag Managers

  • CryoArks Content (animal biobanking for conservation research)
    • Kirsty Lloyd, Natural History Museum London
  • Darwin Tree of Life Content
    • Heather Allen, Natural History Museum London
  • ESBB Content
    • To be decided
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