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| − | =17 July 2018-Natural History Museum's insect pollinators collection now discoverable on GGBN= | + | ==October 30 2024 The Earth BioGenome Project has updated their guidances for Sample Collection and Processing! == |
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| − | The Natural History Museum in London has made available 43,593 frozen specimens of pollinators from the United Kingdom available through GGBN, adding five new families and 68 new genera to GGBN's online collections. | + | The Earth BioGenome Project (EBP) Sample Collection and Processing subcommittee has updated their guidance on all things you need to think about when collecting and preparing specimens that will be used to generate high quality reference genomes. Check it out [https://library.ggbn.org/share/s/y2ovOIbJSIqkg22e1nt1Bg here!] |
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| − | [https://nerc.ukri.org/research/funded/programmes/pollinators/ The Insect Pollinators Initiative] (2010-2015) was a £10 million joint initiative supported by the Biotechnology & Biological Sciences Research Council (BBSRC), the Department for Environment, Food & Rural Affairs (Defra), NERC, the Welcome Trust and the Scottish Government, under the Living With Environmental Change (LWEC) partnership. It supported projects aimed at researching the causes and consequences of threats to insect pollinators and to inform the development of appropriate mitigation strategies to reverse the declines.
| + | ==October 15 2024 Universidad Autónoma de Aguascalientes publishes data through GGBN!== |
| − | The objective of the Insect Pollinators Initiative was to promote innovative research aimed at understanding and mitigating the biological and environmental factors that adversely affect insect pollinators. Its key aims were:
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| − | • To provide an evidence base to inform the conservation of wild insect pollinators and to improve the husbandry of managed species, in order to avoid the potentially catastrophic loss of the ecosystem services they provide.
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| − | • To provide a basis for reducing current declines and sustaining healthy and diverse populations of pollinating insects for the future.
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| − | The IPI’s 9 x research projects generated >45,000 insect pollinator specimens, still holding valuable information and genetic resources after the initiative was complete in 2015. BBSRC then awarded funds to Edinburgh University and the Natural History Museum (NHM) London to salvage these resources and archive the collection in -80 freezers at the NHM, to continue to be discoverable and accessible to future researchers. A total of 43,593 specimens and their metadata were aggregated to form the UK IPI Archive, uploaded to NHM’s Data Portal in 2017 and now published on GGBN.
| + | We are excited to announce that Universidad Autónoma de Aguascalientes (UAA) has published data for the first time through GGBN! There are 2,000 botanical DNA and tissue samples collected in Central Mexico now available online. Check it out [https://www.ggbn.org/ggbn_portal/search/result?institution=UAA%2C+Aguascalientes here]! |
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| − | [[File:NHM_earth_logo.jpeg|center|300px]]
| + | ==October 9 2024 The slides from the SPNHC-TDWG 2024 Conference are now available! == |
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| − | =10 July 2018-ABS workshop report on tracking information on use of genetic material now available=
| + | Slides from the SPNHC-TDWG 2024 Conference session on "Biodiversity Biobanking Network GGBN: A global infrastructure for molecular collections" are now available on the GGBN document library. Check it out [https://library.ggbn.org/share/s/sLmM-4MXQ2mkSsasxojhZA now]! |
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| − | In an effort to provide the GGBN community with additional guidance on meeting the requirements of the Nagoya Protocol, this workshop focused on the need for GGBN collections to track information on use of genetic material. Example workflows were provided by natural history, botanical, and culture collections. This workshop was held on May 25 at the GGBN 2018 Conference in Vienna Austria. The [https://library.ggbn.org/share/s/EhZdr4qFQsiP3vpf_EhI7w report] may be accessed through GGBN's document library.
| + | ==October 9 2024 The 2024 GGBN Newsletter is now available! == |
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| − | =09 July 2018-The African Centre for DNA Barcoding makes DNA collection discoverable=
| + | We are excited share the latest edition of the GGBN Newsletter is now available! Within the 2024 GGBN newsletter you'll find all the highlights, updates, and events that have shaped our community over the past year. We hope you enjoy this [https://library.ggbn.org/share/s/HCsKPlHXQBaSD18NmEZNqg newsletter]! |
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| − | We are proud to announce that the African Centre for DNA Barcoding has made its DNA collection available as part of the GGBN-GGI 2017 awards program, making it the first GGBN African partner to make its genetic collections discoverable through GGBN. The collection includes 13,169 botanical DNA samples (flowering plants and ferns primarily from Africa) adding 42 new families and 20 new genera to the GGBN online collections.
| + | [[File:GGBN_Sep2024_Newsletter.jpg|center|350px]] |
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| − | See The African Centre for DNA Barcoding's [http://www.ggbn.org/ggbn_portal/stats/details?registry=ACDB%2C+Johannesburg statistics page] for more information on this collection.
| + | ==September 5 2024 Museo Nacional de Ciencias Naturales joins GGBN! == |
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| − | [[File:logofloat.png|center|300px]]
| + | We are pleased to announce Museo Nacional de Ciencias Naturales (MNCN) has joined GGBN! Museo Nacional de Ciencias Naturales is located in Madrid, Spain. |
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| − | =27 June 2018-GGBN 2018 Conference slides now available=
| + | [[File:Logo_mncn_2024.jpg|center|350px]] |
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| | + | ==April 30 2024 GGBN and ERGA Webinar Series on Science Policy for Biodiversity Research on Youtube== |
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| − | Presentations from GGBN’s 2018 Conference are now linked directly from the [https://meetings.ggbn.org/conference/ggbn/2018/schedConf/program GGBN online conference program].
| + | Both parts of the GGBN, the European Reference Genome Atlas (ERGA) and the Earth BioGenome Project (EBP) series focused on ABS - Nagoya Protocol and DSI are now uploaded on YouTube! Check it out [https://www.youtube.com/playlist?list=PL4qmCfIUT9K-cgswMIZdd89p3ZUhol-OH here]! |
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| − | Slides may also be accessed through GGBN’s document library, under the GGBN 2018 Conference folder.
| + | [[File:Youtube-logo-2431.png|center|350px]] |
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| − | A report from the ABS workshop with direct links to the presentations will be posted soon.
| + | ==March 25 2024 GGBN and ERGA Hosts a Webinar Series on Science Policy for Biodiversity Research == |
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| − | =21 June 2018-GGBN supports Joint Stakeholder statement on DSI=
| + | We're happy to announce that GGBN and European Reference Genome Atlas (ERGA) with the support of Digital Sequence Information (DSI) network are organizing a two-part webinar series focused on ABS (Access and Benefit Sharing), the Nagoya Protocol and DSI this April. Join us by filling the registration form [https://www.cognitoforms.com/ERGAEuropeanReferenceGenomeAtlas/APrimerOnSciencePolicyForBiodiversityResearchWebinarSeries here]! Spots are limited. |
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| − | GGBN supports the [https://library.ggbn.org/share/s/EC6BeMCbQmuHNtSnxiZKLA Joint Stakeholder statement on Digital Sequence Information], along with 57 organizations, including public and private sector organizations, academic and scientific institutions, data repositories and collections at international, regional and national level, from Europe, North and South America, Asia and Africa.
| + | [[File:ERGA_GGBN_Webinar-3_page-0001.jpg|center|350px]] |
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| − | =14 June 2018-DNA Bank of the Universidad Autónoma de Aguascalientes joins GGBN= | + | ==February 1 2024 Royal Belgian Institute of Natural Sciences joins GGBN! == |
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| − | We are proud to announce that the [http://www.uaa.mx/ Universidad Autónoma de Aguascalientes] has joined GGBN as its 72nd member. The collection comprises 813 DNA and 1166 tissue samples representing approximately 400 species from central Mexico. | + | We are pleased to announce the Royal Belgian Institute of Natural Sciences (RBINS) has joined GGBN! Located in Brussels, Belgium, the Royal Belgian Institute of Natural Sciences has 6,000 DNA samples, 6,500 tissue samples, and 38,000 specimens in their collections. |
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| − | [[File:ADNUAA.jpeg|center|300px]] | + | [[File:RBINS_logo_complet_(2).jpg|center|350px]] |
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| − | =09 June 2018-GGBN featured in Vienna's newspaper derStandard.at= | + | ==January 4 2024 2023 SYNTHESYS Biobanking Handbooks are Now Available! == |
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| − | The GGBN 2018 Conference made the papers in Vienna, see the full article entitled [https://derstandard.at/2000081042840/Die-Vermessung-der-Arten Die Vermessung der Arten] on derStandard.at's website. | + | The fourth (and last) publication of the GGBN-led SYNTHESYS+ work package NA3: "Molecular collections in the age of genomics – standards & |
| | + | processes" has been released! They are now posted to the GGBN Document Library. Click [https://library.ggbn.org/share/s/Ijs5AFkCSFquS7vZW96KMg here] to take a look! |
| | + | [[File:Synthesys-plus-logo.png|center|350px]] |
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| − | =31 May 2018-Job advertisement-ANTARCTIC BIOLOGICAL AND MICROBIAL DATA MANAGER= | + | ==January 4 2024 2023 GGBN Report Now Available! == |
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| − | The Royal Belgian Institute for Natural Science is looking for a master or Postdoc in molecular ecology for a contract of limited duration (October 2018-September 2019) who will join the Antarctic team of the Biodiversity and Ecosystems Data and Information Centre part of OD Nature.
| + | We are excited to announce that the GGBN December 2023 Report is now available! This report highlights GGBN contributions, conferences, online discoverability and more from the past year. Head to the [https://library.ggbn.org/share/s/YKaykzh2QD-q2yByCgMJqw GGBN Document Library] to take a look! |
| − | This team is in charge of the management of biodiversity and ecosystem data resulting, for example, from the federal monitoring programmes of the marine environment or from research projects in marine and Antarctic sciences. | |
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| − | AntaBIS (www.biodiversity.aq) is a BelSPO (www.belspo.be)-funded project that aims at constructing a dedicated Antarctic biodiversity virtual Laboratory in the framework of the EU Lifewatch program, providing tools for the discovery and analysis of Antarctic biodiversity data.
| + | ==December 7 2023 Tissue Samples Made Discoverable Through GGBN== |
| − | Biodiversity.aq creates new ways of exploring and understanding Antarctic biodiversity by linking various online resources. Biodiveristy.aq contributes Antarctic biodiversity Data to global initiates such as the Ocean Biogeographic Information System (www.iobis.org) and the Global biodiversity Information Facility (www.gbif.org). The Register for Antarctic (Marine) species (www.marinespecies/RAMS) provides access to Antarctic taxonomic data and forms the taxonomic backbone for our other portals.
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| − | The data portal (data.biodiversity.aq) allows users explore and download Antarctic biodiversity. Our Microbial Antarctic Resource System (mARS.biodiversity.aq) is a unique platform that allows researcher to explore next generation sequencing data and environmental data (http://antabis.bedic.be/mars/).
| + | We are excited to announce the organizations who provided data for the first time in 2023: CMN, Ottawa, Canadian Museum of Nature, INRAE, Paris, National Institute of Research for Agriculture, Food and Environment, HNT, San Marino, The Huntington, and UNAL, Bogota, Universidad Nacional de Colombia / National University of Colombia. |
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| − | We seek an enthusiastic data manager to assist in the construction of this Antarctic biodiversity virtual laboratory. The successful candidate will be responsible for publication of various types of biodiversity data. The main focus will be on enriching the content of the mARS portal and the further development and maintenance of this portal.
| + | [[File:CMN.png|center|350px]] [[File:INRAE.jpg|center|350px]] [[File:HTG logo.jpg|center|350px]] [[File:UNAL logo 600x300.png|center|350px]] |
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| − | The Data Manager Officer will be offered a one-year, full time position starting September 1st, 2018 or as soon as possible, and will be based at the Royal Belgian Institute of Natural Sciences (www.naturalsciences.be). She/he will work under the supervision of the Project Promoter and in close collaboration with the AntaBIS data scientist. There is potential to extend the duration of the position but this will depend on available funding and positive evaluation.
| + | ==December 6 2023 National Herbarium of Rwanda, University of Rwanda joins GGBN == |
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| − | The successful candidate will work for 12 months in the context of one of the Belgian Federal contributions to EU Lifewatch (www.lifewatch.be) This work will be done in collaboration with a wide variety of international collaborators. The work handles the data management component of this project, and focuses mostly on the microbial Antarctic Resource System (mARS) mARS.biodiversity.aq.
| + | We are happy to announce that the National Herbarium of Rwanda[https://herbariumrwanda.ur.ac.rw/] at the University of Rwanda has joined GGBN. Collections include 50 eDNA and 20,000+ tissue samples representing plants, terrestrial invertebrates, and vertebrates. Samples are managed with Symbiota and Excel. |
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| − | Tasks
| + | [[File:Herbarium of Rwanda.png|center|350px]] |
| − | *The development, the maintenance and the management of the mARS database (PostgreSQL,…) and of it’s query interfaces ;
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| − | *Harvesting of data in public repositories (e.g. genbank SRA) , contacting data providers and users; communications in English;
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| − | *Quality control of the data (environmental and DNA sequence information) using relevant data standards (e.g. Darwincore, TDWG), their archiving, their reporting and their scientific exploitation;
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| − | *Publication of data in mARS, OBIS and GBIF;
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| − | *In collaboration with AntaBIS staff and partners:
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| − | - Identify existing tools for the analysis of (microbial) Antarctic biodiversity data;
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| − | - Evaluate online workflows using these tools and in particular their benefit to the Antarctic (microbial) research community
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| − | - Participation in national and international projects dealing with marine data management.
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| − | DIPLOMA
| + | ==The GGBN 2023 International Conference Presentations are Available to Watch on YouTube== |
| − | *Candidates must hold a PhD or a Master degree in science or applied sciences, with a strong preference for a background bioinformatics or Antarctic Microbial biology.
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| − | *They will demonstrate a wide analytical insight and a strong interest in the technical side of data management.
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| − | TECHNICAL COMPETENCE
| + | The 2023 GGBN International Conference presentations are now available to watch on our YouTube page [https://www.youtube.com/watch?v=NfOFuKPmJMQ&list=PLxCMSf8YBiw8RZX6q-_cs-y0nM103_-Is here]! Check out some of the amazing talks from the conference! |
| − | *Candidates should have a strong taste for bioinformatics; a good knowledge in data management and relational database, geospatial tools, biodiversity informatics standards.
| + | [[File:Youtube-logo-2431.png|center|350px]] |
| − | *Experience with scientific programming (preferably using R and/or Python) as well as the use of software project hosting and version control systems such as GitHub or Gitlab.
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| − | GENERIC COMPETENCE
| + | ==November 06 2023 GGBN 2023 GGBN Announces 2025 Conference Host== |
| − | *Enthusiasm and an outstanding ability to collaborate in a multi-disciplinary and international team ;
| + | We are happy to announce the South African National Biodiversity Institute and Biodiversity Biobanks South Africa as the host for the 2025 GGBN Conference in Cape Town, South Africa! Learn more about the institute [https://www.sanbi.org/ here] |
| − | *Good organisational skills ;
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| − | *Strong communication skills ;
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| − | *Can operate independently yet work as part of a distributed team.
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| − | ASSETS
| + | [[File:Large SANBI Logo new.jpg|center|350px]] |
| − | *Having excellent networking and communication skills in English is absolutely required; a good working knowledge of additional European language(s), in particular Dutch and/or French, is an asset;
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| − | *Experience in microbial molecular research ;
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| − | *Experience working in polar research ;
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| − | *Experience with scientific networking on international level, and/or Antarctic research;
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| − | *Experience with relevant biodiversity data standards (TDWG, Darwincore, MiMarks, ….).
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| − | We offer
| + | ==October 16 2023 GGBN 2023 Conference Program Available Now== |
| − | *A contract of limited duration for 12 months ;
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| − | *Remuneration of the wage scale for grade SW1 ;
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| − | *Free public transport between the city and the Institute.
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| − | The regular working place is located in 1000 Brussels (Vautierstraat 29, 1000 Brussels) , with the possibility of a few foreign missions (project meetings, conferences, …) per year. The wages will granted according to the rules in force for scientific staff of the federal administration. The employment contract has a fixed duration but may be extended condition to available funding and positive evaluation. | + | The 2023 GGBN International Conference program is now available to view [https://ggbn2023.weebly.com/conference-program.html here]! Click to see presentation details, recommendations to do during your stay in Aguascalientes (if in person) and more. |
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| − | How to apply
| + | ==September 7 2023 Hybrid Registration for 2023 GGBN International Conference Available Now== |
| − | Send before 15 June 2018 your motivation and CV to:
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| − | Royal Belgian Institute of Natural Sciences
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| − | Anton Van de Putte
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| − | Gulledelle 100
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| − | 1200 Brussels
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| − | Email: Avandeputte@naturalsciences.be or antonarctica@gmail.com with heading: job application AntaBIS-mARS
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| | + | The 2023 GGBN International Conference will now be hybrid for those who want to join via Zoom! Virtual participants can register for $50 on [https://www.etix.com/ticket/c/417BD8523BDDF67177ECE60A52B3A32E/hybrid-participation Etix]. There is also still time to register for those who want to attend the conference in person! Click [https://ggbn2023.weebly.com/registration--abstract-submission.html HERE] to register. |
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| − | =11 May 2018-University of Guelph's Genetic Archive adds roughly 1.5 million DNA extracts to GGBN= | + | ==August 11 2023 NEON Biorepository, Arizona State University joins GGBN== |
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| − | One of the planet’s largest collections of DNA samples – a genetic Noah’s ark held at the University of Guelph representing Canadian creatures from mites to whales — is now available to researchers through the GGBN Data Portal, adding roughly 1.5 million DNA extracts to GGBN's online collection, which now totals over 3.6 million records online.
| + | We are pleased to announce the [https://biorepo.neonscience.org/portal/ NEON Biorepository, Arizona State University] has joined GGBN. Located in Tempe, Arizona, the NEON Biorepository has 31,358 DNA samples, 43,814 tissue samples, and 104,564 environmental samples. |
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| − | See the University of Guelph's [https://news.uoguelph.ca/2018/05/u-gs-genetic-archive-now-open-world/ press release] and [http://www.ggbn.org/ggbn_portal/stats/details?registry=BIOUG%2C+Guelph GGBN's statistics pages] for more information.
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| − | [[File:CBGlogo.png|center|300px]] | + | [[File:NEON-NSF.png|center|350px]] |
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| − | =24 April 2018-Earth BioGenome Project refers to GGBN as world's major resource of tissues and DNA=
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| − | [https://www.earthbiogenome.org/ The Earth Biogenome Project], an effort to sequence the DNA of all known eukaryotic species on Earth, refers to GGBN as "the world’s major resource of tissues and DNA from voucher specimens" in it's [https://www.ucdavis.edu/news/earth-biogenome-project-aims-sequence-dna-all-complex-life press release].
| + | ==August 07 2023 GGBN 2023 Conference: Abstract Submissions and General Registration Close August 31st== |
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| − | [[File:EBP.png|center|300px]]
| + | We are still accepting abstracts for the upcoming GGBN International Conference on Biodiversity Biobanking, taking place 17-20 October 2023 in Aguascalientes, Mexico. Please see the latest conference announcement attached for session details. |
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| − | =06 April 2018-GGBN 2018 Conference Program now available, registration open=
| + | Important deadlines: |
| | + | General registration closes August 31st, late registration is open from September 1-October 1. |
| | + | The last day to submit your abstracts is August 31st. |
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| − | The GGBN 2018 conference program is now available on our [https://meetings.ggbn.org/conference/ggbn/2018/schedConf/program conference page]. Please note that we are still accepting last minute registrations. For those who still wish to register, please do so [https://meetings.ggbn.org/conference/ggbn/2018/schedConf/registration here].
| + | Please submit your abstracts and complete registration [https://ggbn2023.weebly.com/registration--abstract-submission.html HERE] |
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| − | [[File:GGBN 2018.png|center|300px]]
| + | [[File:Logo-ggbn-uaa-2023.jpg|center|350px]] |
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| − | =28 March 2018-Natural History Museum and Botanical Garden, University of Tartu joins GGBN=
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| − | We are proud to announce that the [http://www.natmuseum.ut.ee/en Natural History Museum] and [https://www.botaanikaaed.ut.ee/en Botanical Garden], University of Tartu has joined GGBN as its 71st member. The collection comprises 370,000 tissues representing plants, fungi and lichens, more than 250,000 tissues representing animals, 1,500 soil samples and 2,000 living cultures of fungi, in addition to 30,000 DNAs. Collections are estimated to represent more than 50,000 species of macroorganisms and greater than 100,000 species of microorganisms.
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| − | [[File:Tartulogo.png|center|300px]]
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| − | =27 March 2018-GGBN annual newsletter now available=
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| − | GGBN's [https://library.ggbn.org/share/s/qWNlMCU7RjutLMmiXeg5_Q March 2018 Newsletter]is now available through the GGBN document library.
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| − | [[File:ENewsletter2018Page1.jpg|center|300px]]
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| − | =13 March 2018-Document Library Call for Content Managers=
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| − | The sub/categories below currently have vacancies for Category Managers, and so present a great opportunity for people to take on these roles for their chosen category, join the Document Library Task Force team developing a world class knowledge exchange platform for genomic biodiversity biobanking, and help by participating in and contributing to GGBN activities globally. The library offers a perfect customized system for anyone interested in genomic biodiversity collections who wants to organize, curate (using tag/search functions etc), their own personal document library (papers, protocols, procedures, policies, best practices etc), enhance content by aggregation, and share with colleagues worldwide. If you would like to join us as a GGBN Document Library Category Manager (and we wholeheartedly recommend it!) please contact us at library@ggbn.org. We look forward to welcoming you on board!
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| − | •Biobank Management (including Governance, Business Models, Health and Safety)
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| − | •Curation Protocols for Microorganisms (including specimen and sample field collection, sample preparation, shipping, laboratory curation and storage methods)
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| − | •Research Protocols (including laboratory specimen and sample analysis: e.g. species specific extraction, amplification, sequencing for fresh and archival/ancient material)
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| − | •Regulation and Legislation including CITES/ Shipping e.g. IATA regulations: Commercial Invoice/Shipping Inventory/Import-Export documentation /Other regulations and tools* (*full list to be decided)
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| − | [[File:GGBN_Doc_Image.jpg|center|300px]]
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| − | =22 February 2018-Webinar on Making DNA and tissue collections available by using the GGBN extensions with IPT now available=
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| − | A recording of the February 21st Darwin Core Hour webinar on Making DNA and tissue collections available by using the GGBN extensions with IPT is now available at: http://idigbio.adobeconnect.com/pfvb99zx6nle/
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| − | =06 February 2018-GGBN 2018 Conference: Important Dates & Deadlines Extended=
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| − | Last chance to secure your EARLY BIRD TICKET!
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| − | Please register [http://oegmbt-events.at/ggbn2018/ here] before February 26th!
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| − | GGBN 2018, the 3rd Conference of the Global Genome Biodiversity Network will take place in Vienna, Austria from May 22 - 25, 2018
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| − | [[File:GGBN 2018.png|center|300px]]
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| − | Sessions are
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| − | • Biodiversity – current challenges, future chances
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| − | • Forest biological diversity – losses and gains
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| − | • Why agricultural diversity matters
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| − | • The hidden biodiversity
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| − | • Amazing animals ex and in situ
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| − | • Genebank management: sampling & preservation
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| − | • Genebank management: data & analytics
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| − | • ABS & Nagoya protocol
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| − | https://meetings.ggbn.org/conference/ggbn/2018/
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| − | =05 February 2018-Finnish Museum of Natural History joins GGBN=
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| − | We are proud to announce that the [https://www.luomus.fi/en Finnish Museum of Natural History LUOMUS, University of Helsinki, Finland] has joined GGBN as its 70th member. The collection comprises DNAs from 2200 Insecta, 500 Bivalvia and 500 Ascomycota and tissues from 4000 Vertebrata representing a total of 1055 species and higher taxa.
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| − | [[File:Luomus_fi-se-en_blue.jpg|center|300px]]
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| − | =31 January 2018-Latest ISBER Best Practices, 4th Ed. now available=
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| − | The most recent revision of [http://www.isber.org/?page=BPR ISBER Best Practices:Recommendations for Repositories Fourth Edition] is out today.
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| − | [[File:ISBERLogos sm.png|center|200px]]
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| − | =25 January 2018-Mobilize Your Data: 2018 Call for Proposals to the GGBN-GGI Awards Program=
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| − | We are happy to announce the [http://wiki.ggbn.org/ggbn/Global_Genome_Biodiversity_Network-Global_Genome_Initiative_Awards_Program 2018 GGBN-GGI Awards Program]. The program provides funding for projects that support the discoverability of new genetic collections through the Global Genome Biodiversity Network's Data Portal. The submission deadline for proposals this year is 1 May 2018. The proposal review committee will consider requests for up to 30,000 USD with clearly articulated budget justifications. All data from funded projects must be made available online on the GGBN Portal before 1 September 2019.
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| − | =11 January 2018-iDigBio’s Darwin Core Hour on February 21: Making DNA and tissue collections available using the GGBN extensions with IPT=
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| − | In this Darwin Core hour we will give a brief overview about the Global Genome Biodiversity Network (GGBN) and the GGBN Data Standard. This standard covers facts about DNA and tissue samples and complements Darwin Core and ABCD. We will demonstrate how to use the GGBN extensions with IPT in detail and how it looks like in the GGBN Data Portal.
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| − | Date: Wednesday, 21 February 2018
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| − | Time: 5 PM CET, 11 EST, 1 PM Buenos Aires
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| − | Where: https://idigbio.adobeconnect.com/room
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| − | For additional information, please visit the [https://www.idigbio.org/content/darwin-core-hour-making-dna-and-tissue-collections-available-using-ggbn-extensions-ipt iDigBio website]
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| − | | |
| − | | |
| − | =09 January 2018-GGBN Data Portal User Survey: please participate by January 23=
| |
| − | | |
| − | GGBN is assessing the usability and functionality of its website and data portal in order to better serve our user community. This survey is designed to gather your feedback concerning the ease of use of the GGBN (Global Genome Biodiversity Network) Data Portal (www.ggbn.org). As primary users, your input is essential for us as we continue to improve the site. Your honest and specific feedback is appreciated.
| |
| − | [https://www.surveymonkey.com/r/8DTBT65 Survey link]
| |
| − | | |
| − | =08 January 2018-Reminder: Early Registration for GGBN 2018 Conference by January 29=
| |
| − | | |
| − | The organizing committee is pleased to announce the opening of registration and the call for abstract submissions.
| |
| − | | |
| − | Abstracts can be submitted after registration and payment have been completed. All submitted abstracts will be considered for short talks or poster presentations by the scientific committee. Please indicate during submission if you prefer a talk or a poster. Poster sessions will offer an additional possibility for scientific exchange.
| |
| − | | |
| − | For EARLY REGISTRATION please register before January 29th! Click [http://oegmbt-events.at/ggbn2018/ HERE] to register.
| |
| − | | |
| − | [[File:GGBN 2018.png|center|600px]]
| |
| − | =05 January 2018-Open access genomic resources for terrestrial arthropods paper published=
| |
| − | | |
| − | Highlights
| |
| − | •Biodiversity genomics research, relies on access to high quality DNA and/or tissue.
| |
| − | •Global collection initiatives aim to provide genomic resources at high-quality standards.
| |
| − | •The status of current genomic resources for terrestrial arthropods in biodiversity databases are reviewed here.
| |
| − | | |
| − | Vanessa L González, Amanda M Devine, Mike Trizna, Daniel G Mulcahy, Katharine B Barker, Jonathan A Coddington. ''Current Opinion in Insect Science.'' Volume 25, February 2018, Pages 91–98. https://doi.org/10.1016/j.cois.2017.12.003
| |
| − | | |
| − | =21 December 2017-Registration for GGBN 2018 Conference now open=
| |
| − | | |
| − | The organizing committee is pleased to announce the opening of registration and the call for abstract submissions.
| |
| − | | |
| − | Abstracts can be submitted after registration and payment have been completed. All submitted abstracts will be considered for short talks or poster presentations by the scientific committee. Please indicate during submission if you prefer a talk or a poster. Poster sessions will offer an additional possibility for scientific exchange.
| |
| − | | |
| − | For EARLY REGISTRATION please register before January 12th! Click [http://oegmbt-events.at/ggbn2018/ HERE] to register.
| |
| − | | |
| − | [[File:GGBN 2018.png|center|600px]]
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| − | | |
| − | =19 December 2017- National museum, Prague joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the [http://www.nm.cz/index.php?xSET=lang&xLANG=2 Národní muzeum / National museum], Prague, Czech Republic has joined GGBN as its 69th member. The NM’s biodiversity biobank includes approximately 500 DNA and 4000 tissue samples representing 250 species.
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| − | | |
| − | [[File:LogoNM2.jpg|center|300px]]
| |
| − | | |
| − | =12 December 2017- CNGB-BGI makes tissue collection available through GGBN=
| |
| − | | |
| − | The China National GeneBank-Beijing Genomics Institute has made 235 bird samples discoverable through the GGBN data portal. These samples are the first subset of samples from its DNA and tissue collection to be made available through GGBN. More information on CNGB’s available tissue records can be found [http://www.ggbn.org/ggbn_portal/stats/details?registry=CNGB%2C+Shenzhen here]
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| − | | |
| − | [[File:CNGBlogo.jpg|center|400px]]
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| − | | |
| − | =15 November 2017-Collaboration brings Specify into compliance with GGBN's data standard recommendation=
| |
| − | | |
| − | The Global Genome Biodiversity Network and the [http://www.specifysoftware.org Specify Software Project] are pleased to announce the fruition of a joint software effort to facilitate the communication of genetic sample data to the GGBN Portal from biological museums around the world. Specify is a collections database management platform used by 450+ biological museum collections worldwide.
| |
| − | | |
| − | The collaboration has brought Specify into compliance with GGBN’s data standard recommendations for describing genetic samples (frozen tissues and DNA extracts) deposited in biological museums. The joint effort also resulted in the implementation of a new network capability in the Specify 7 web platform for automating the assembly and publication of Darwin Core Archives using the GGBN Material Sample Vocabulary or any other Darwin Core extension. Darwin Core Archive files are used for communicating specimen and sample data between museums and biodiversity data aggregators.
| |
| − | | |
| − | The work extended the Specify’s database schema by adding a ‘Material Sample’ table and new logical relationships to robustly support the use of frozen tissues and DNA extracts in biological museums to document biological diversity and for phylogenetic research. The Specify Software Project has also updated the Specify user interface to accommodate the new genetic resource data types.
| |
| − | | |
| − | This new support for tissues and molecular extracts is available now in Specify 6.6.06 and 7.3. The embedded Darwin Core Archive publisher is available in Specify 7, which is downloadable from the product’s [http://www.github.com/specify GitHub site].
| |
| − | | |
| − | The Specify Software Project looks forward to supporting these new features for museums worldwide with genetic resource collections to promote the aggregation of tissue and extract data in the [http://www.ggbn.org/ggbn_portal GGBN Portal].
| |
| − | | |
| − | The Specify Software Project is an open-source initiative that has provided biological museums for 30 years with robust data management platforms and research data management services for curating and processing biological specimen information. The Specify Project is grateful for the technical and financial support of the Global Genome Initiative underwriting the development of these integration capabilities.
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| − | | |
| − | =14 November 2017 - Brazilian ABS Electronic System now available=
| |
| − | | |
| − | We are pleased to report that the [https://sisgen.gov.br/paginas/login.aspx SisGen registration system] is now available. The registration system for using Brazil’s genetic heritage materials for research allows for Brazilian Biological material to be legally shipped abroad for research. SisGen was created to manage: registration (access to genetic heritage, access to associated traditional knowledge, shipping genetic heritage, and sending genetic heritage), notification (on finished products and use of reproductive material) and accreditation (for national institutions maintaining ex situ collections that hold genetic heritage).
| |
| − | | |
| − | [[File:Brazil-flag.png|center|300px]]
| |
| − | | |
| − | =24 October 2017 - HTS library metadata public review started=
| |
| − | Last year the Global Genome Biodiversity Network (GGBN, http://www.ggbn.org) has published the GGBN Data Standard, which covers terms related to DNA and tissue samples (https://terms.tdwg.org/wiki/GGBN_Data_Standard, [https://library.ggbn.org/share/s/E3qbuKsJSwaI67IWItXCKw Droege et al. 2016]).
| |
| − | | |
| − | In addition to genomic DNA the development and use of high-throughput next generation sequencing (HTS) have outstripped current plans of SYNTHESYS (http://www.synthesys.info) and GGBN to join natural history (NH) collection data with DNA and tissue collection data. HTS libraries can be considered a preparation of the genetic material of an organism(s), the actual physical molecular representation of a collection/specimen. These libraries come with specific adaptors that limit their transferability to other sequencing systems. They are prepared at great expense, but usually are only used for a single project, whilst a great deal of additional useful information may be available within these libraries.
| |
| − | | |
| − | HTS library parameters already in the GGBN Data Standard have been reviewed and augmented in order to incorporate library metadata of existing as well as future techniques. This is being realized by preparation of use-cases incorporating a range of different HTS techniques (e.g. whole genome shotgun sequencing, RADseq sequencing, single molecule MinIon sequencing).
| |
| − | | |
| − | Now we are seeking your feedback and invite you to the public review. More information can be found at [[HTS Public Consultation]]
| |
| − | | |
| − | =20 October 2017-The Czech Academy of Sciences adds 11 fish genera to GGBN=
| |
| − | | |
| − | The Institute of Vertebrate Biology, The Czech Academy of Sciences, has made 1500 new fish samples from Central Europe discoverable through the GGBN data portal. This is the first output of their 2017 GGBN-GGI Awarded project. Publication of other datasets (e.g. on African small mammals) will follow. European fish records are currently underrepresented at GGBN and these new samples, originating from years 1988-2016, added one new family and 11 new genera to the GGBN database.
| |
| − | | |
| − | See http://www.ggbn.org/ggbn_portal/stats/details?registry=IVB%2C+Brno&sampletype=tissue for statistics on IVB’s online collections.
| |
| − | | |
| − | | |
| − | [[File:UBO-logo-angl-color.gif|center|500px]]
| |
| − | | |
| − | =16 October 2017 - Brazilian ABS Electronic System available November 6th=
| |
| − | | |
| − | We are pleased to report that the SisGen registration system will be available starting November 6th 2017. The registration system for using Brazil’s genetic heritage materials for research allows for Brazilian Biological material to be legally shipped abroad for research. SisGen was created to manage: registration (access to genetic heritage, access to associated traditional knowledge, shipping genetic heritage, and sending genetic heritage), notification (on finished products and use of reproductive material) and accreditation (for national institutions maintaining ex situ collections that hold genetic heritage).
| |
| − | | |
| − | [[File:Brazil-flag.png|center|300px]]
| |
| − | | |
| − | =10 October 2017 - GGBN 2018 Conference May 22-25 in Austria: Save the Date=
| |
| − | It is our pleasure to announce that GGBN 2018, the 3rd Conference of the Global Genome Biodiversity Network, will take place in Vienna, Austria from May 22 - 25, 2018. More information can be found in the [https://library.ggbn.org/share/s/DjMcVoEsQRqczT4bVnlWrw announcement].
| |
| − | | |
| − | The invited speakers will be announced on the GGBN website soon. We invite participants to submit abstracts for oral and poster presentations through the GGBN 2018 Conference registration system starting in November 2017. Please see https://meetings.ggbn.org/conference/ggbn/2018/ for additional information.
| |
| − | | |
| − | [[File:GGBN 2018.png|center|600px]]
| |
| − | | |
| − | =09 October 2017 - GGBN Researcher/Software Developer Job Opening=
| |
| − | | |
| − | Freie Universität Berlin
| |
| − | ZE Botanic Garden and Botanical Museum Berlin
| |
| − | | |
| − | Researcher/Software Developer GGBN 2020
| |
| − | | |
| − | [http://bgbm.org/en/biodiversity-informatics The Research Group Biodiversity Informatics] at the Botanic Garden and Botanical Museum Berlin, Freie Universität Berlin has an opening for a Researcher/Software Developer - German federal salary level EG 13 TV‐L FU, 100% (Scientist/Senior Scientist).
| |
| − | | |
| − | Duration: 18 months
| |
| − | | |
| − | Job description
| |
| − | Evaluation and revision of the GGBN software architecture (http://www.ggbn.org). Evaluation and development of automated and semi-automated updating of the GGBN-Index (SOLR). Evaluation and development of data quality functions. Development of web-service interfaces between technical components of the GGBN platform.
| |
| − | | |
| − | The BGBM's “Research and Development Group Biodiversity Informatics and Scientific Information Systems” is a leading institution for biodiversity informatics research with numerous national and international projects (BMBF, DFG, BMU, EU). The interdisciplinary team consists of computer scientists, biologists, bioinformaticians, and engineers. Important research topics include information modelling and standardisation of Meta data, networking
| |
| − | of primary biodiversity data, and taxonomic computing.
| |
| − | | |
| − | Requirements
| |
| − | The candidate must have a university degree (Master/Diploma) in computer science, bioinformatics, or a similar scientific discipline.
| |
| − | | |
| − | Desirables
| |
| − | | |
| − | • Very good knowledge of indexing technologies (e.g. SOLR, Lucene).
| |
| − | • Good knowledge of object‐oriented information modelling.
| |
| − | • Very good knowledge of Java and PHP.
| |
| − | • Experience with relevant frameworks such as Spring, Hibernate, Maven, and Yii.
| |
| − | • Very good English communication skills.
| |
| − | • A familiarity with the relevant scientific biodiversity informatics data standards as well as experience with collaborating in a transnational development project is also advantageous.
| |
| − | | |
| − | Applications accompanied by cover letter, tabular CV, and proof of degree
| |
| − | should be submitted by 23.10.2017 electronically by email (Ref. GGBN‐2020) to av- p@bgbm.org or in paper form by mail to
| |
| − | | |
| − | Freie Universität Berlin, Zentraleinrichtung Botanischer Garten und Botanisches Museum
| |
| − | Berlin‐Dahlem, ‐ AV ‐, Ref. GGBN‐2020, Königin‐Luise‐Str. 6‐8, 14195 Berlin, Germany
| |
| − | | |
| − | The FUB adheres to the German disability guidelines and is an Affirmative Action/Equal Opportunity Employer. Applications from women are especially encouraged.
| |
| − | | |
| − | =29 September 2017 - Randers Regnskov Tropical Zoo joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the [https://www.regnskoven.dk/en/ Randers Regnskov Tropical Zoo] has joined GGBN as its 68th member. The Zoological Garden has recently started their biodiversity biobank, which includes tissue samples and DNAs.
| |
| − | | |
| − | [[File:Randers.png|center|300px]]
| |
| − | | |
| − | =29 August 2017 - Centre for Biodiversity Genomics joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the [http://biodiversitygenomics.net/ Centre for Biodiversity Genomics] has joined GGBN as its 67th member. The CBG biodiversity biobank includes over 3,000,000 specimens within its collection, representing 12,882 species. A subset of these collections will be made discoverable through the GGBN data portal as part of the 2017 GGBN-GGI awards program.
| |
| − | | |
| − | [[File:CBG-logo.png|center|300px]]
| |
| − | | |
| − | =21 August 2017 - GGBN Asian Regional Workshop Report now available=
| |
| − | | |
| − | The GGBN Asian Workshop Report is now available through the [https://library.ggbn.org/share/s/Qv1Uko_XQMS3tV-NzGydYA GGBN Document Library],
| |
| − | | |
| − | You can sign up for a GGBN document library account by e-mailing us at library@ggbn.org
| |
| − | | |
| − | [[File:GGBNAsian.jpg|center|600px]]
| |
| − | | |
| − | =21 August 2017 - GGBN Data Portal - Full text search enabled=
| |
| − | | |
| − | Full text search is a standard requirement today. After testing in the GGBN Sandbox for a few months we are happy to announce, that this feature is now enabled in the live portal too.
| |
| − | | |
| − | You can now use standard Boolean operators like NOT, OR, AND to perform your searches (http://www.ggbn.org/ggbn_portal/search/index). This is enabled for e.g. scientific name, country, locality and collector. We have updated the documentation to provide you some guidance: [[GGBN Data Portal Explanations]].
| |
| − | | |
| − | We hope this improves the usability of the GGBN Data Portal. In fall we will also launch a survey regarding general usability of ggbn.org.
| |
| − | Please don’t hesitate to contact us if you have any questions or feedback at [mailto:support@ggbn.org support@ggbn.org] or by using the feedback button on the left of the portal page.
| |
| − | | |
| − | =11 August 2017 - Missouri Botanical Garden joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the [http://www.missouribotanicalgarden.org/ Missouri Botanical Garden] has joined GGBN as its 66th member. The collection represents 22,700 samples of dried leaf tissue in silica gel, representing approximately 10,000 species.
| |
| − | | |
| − | [[File:mbg_logo.jpg|center|300px]]
| |
| − | | |
| − | =09 August 2017 - China Biodiversity Conservation and Green Development Foundation joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the [http://www.cbcgdf.org/ China Biodiversity Conservation and Green Development Foundation] has joined GGBN as its 65th member. CBCDGF is a Chinese NGO focused on environmental conservation. CBCDGF will contribute to the work of GGBN in three major ways. First, by creating awareness among environmental NGOs and institutions in China, second, by creating a network of environmental NGOs across the Belt and Road route in an effort to collect genetic samples for deposition in GGBN member biorepositories, and third, by creating awareness of GGBN across Africa, in an effort to expand GGBN membership in this region.
| |
| − | | |
| − | [[File:CBCGDF_LOGO.jpg|center|300px]]
| |
| − | | |
| − | =07 August 2017 - Denver Botanic Gardens makes its tissue collections available through GGBN=
| |
| − | | |
| − | The Denver Botanic Gardens has made a subset of its tissue collection discoverable through the GGBN data portal. This includes 336 tissue samples from the class Magnoliopsida. More information on DBG's available tissue records can be found [http://www.ggbn.org/ggbn_portal/stats/details?registry=DBG%2C+Denver here]
| |
| − | | |
| − | [[File:DBG_logo.png|center|300px]]
| |
| − | | |
| − | =31 July 2017 - University of Alaska Museum of the North joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the University of Alaska Museum of the North has joined GGBN as its 64th member. The UAM tissue collection comprises over 200,000 tissue samples and 4,990 DNA samples representing approximately 6,500 species. A subset of these collections will be made discoverable through the GGBN data portal as part of the GGBN-GGI award to the Museum of Southwestern Biology and the Arctos Steering Committee.
| |
| − | | |
| − | [[File:MOTN_.jpg|center|300px]]
| |
| − | | |
| − | For more information on UAM, please visit [https://www.uaf.edu/museum/ UAM's website].
| |
| − | | |
| − | =11 July 2017 - University of California, Berkeley, Museum of Vertebrate Zoology joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the University of California, Berkeley, Museum of Vertebrate Zoology has joined GGBN as its 63rd member. The MVZ tissue collection comprises over 99,000 tissue specimens and 4,570 DNA samples. The collection includes approximately 31,900 amphibians, 14,500 reptiles, 15,600 birds, and 37,300 mammals. A subset of these collections will be made discoverable through the GGBN data portal as part of the GGBN-GGI award to the Museum of Southwestern Biology and the Arctos Steering Committee.
| |
| − | | |
| − | [[File:MVZ_Logo_LargeFancy180.png|center|300px]]
| |
| − | | |
| − | For more information on MVZ, please visit [http://mvz.berkeley.edu/ MVZ's website].
| |
| − | | |
| − | =11 July 2017 - African Centre for DNA Barcoding joins GGBN=
| |
| − | | |
| − | We are pleased to announce that the African Centre for DNA Barcoding has joined GGBN as its 62nd member. The ACDB is a division of the departments of Botany and Plant Biotechnology, and Zoology of the University of Johannesburg, South Africa. The collection includes 7452 plant and 521 animal species.
| |
| − | | |
| − | As part of its recent GGBN-GGI award, ACDB will be making approximately 239 plant families and 7452 plant samples discoverable through the GGBN data portal.
| |
| − | | |
| − | [[File:Logofloat.png|center|300px]]
| |
| − | | |
| − | For more information on ACDB, please visit [http://acdb.co.za/ ACDB's website].
| |
| − | | |
| − | =05 July 2017 - Centro de Ornitología y Biodiversidad (CORBIDI) joins GGBN=
| |
| − | | |
| − | [[File:Logo Corbidi final HD.jpg|center|300px]] | |
| − | | |
| − | We are pleased to announce that the Centro de Ornitología y Biodiversidad (CORBIDI) has joined GGBN as its 61st member.
| |
| − | | |
| − | As part of its recent GGBN-GGI award, CORBIDI will be making a subset of its herpetological collection discoverable through the GGBN Data Portal. With only nine years of creation and more than 17000 specimens, between amphibians and reptiles, the herpetological collection of CORBIDI is one of the most important collections in Peru.
| |
| − | | |
| − | For additional information on CORBIDI, please visit the [http://www.corbidi.org/ website].
| |
| − | | |
| − | =21 June 2017 - University of Kansas Biodiversity Institute joins GGBN=
| |
| − | | |
| − | [[File:KU_logo.jpg|center|300px]]
| |
| − | | |
| − | We are pleased to announce that the University of Kansas Biodiversity Institute has joined GGBN as its 60th member. The collection comprises approximately 10,000 DNA and 120,000 tissue samples representing over 6,000 species.
| |
| − | | |
| − | For more information on the University of Kansas Biodiversity Institute, please visit the [https://biodiversity.ku.edu/ Biodiversity Institute's website]
| |
| − | | |
| − | =16 June 2017 - GGBN North American Regional Workshop Report now available=
| |
| − | | |
| − | The GGBN 2017 North American Regional Workshop Report is now available through our [https://library.ggbn.org/share/s/Zthsd4U1TWimN7XvHLXJZA document library]
| |
| − | | |
| − | PDFs of select presentations can be accessed through our [https://meetings.ggbn.org/conference/ggbn/2017ws-na/schedConf/program website]
| |
| − | | |
| − | If you still do not have a GGBN Document Library account, please e-mail us at library@ggbn.org to set up an account.
| |
| − | | |
| − | | |
| − | =06 June 2017 - GGBN-GGI Awards Program, 2017 Awardees=
| |
| − | | |
| − | We are pleased to announce the results of the 2017 GGBN-GGI Awards Program. The GGBN-GGI awards program received a total of 18 proposals representing 17 institutions in 11 countries. Total funding requested was over 500,000 USD. The proposals were reviewed and ranked by a committee representative of GGBN membership. The committee ranked the proposals based on seven criteria, including: complementarity to existing collections on GGBN; the size, scope and quality of your collection; genomic novelty of the collection; adherence to GGBN best practices; the efficiency or cost-effectiveness of the proposal; contribution to the GGBN community; and the timeline of completion. In light of available funds, the top six proposals were funded, totaling 139,401 USD.
| |
| − | | |
| − | 2017 Awardees Include:
| |
| − | *Biodiversity Research and Teaching Collections, Texas A&M
| |
| − | *Centre for Biodiversity Genomics, University of Guelph
| |
| − | *Centro de Ornitología y Biodiversidad
| |
| − | *The Czech Academy of Sciences, Institute of Vertebrate Biology
| |
| − | *Museum of Southwestern Biology
| |
| − | *University of Johannesburg
| |
| − | | |
| − | Titles and abstracts for each awarded project are listed on the GGBN-GGI Awards [http://wiki.ggbn.org/ggbn/Global_Genome_Biodiversity_Network-Global_Genome_Initiative_Awards_Program wiki page].
| |
| − | | |
| − | =22 May 2017 - GGBN ABS Fact Sheet and FAQ now available=
| |
| − | | |
| − | The GGBN Policies task force is happy to announce that the GGBN Access and Benefit Sharing Fact Sheet and Answers to Frequently Asked Questions about Access and Benefit Sharing and the Nagoya Protocol is now available through our [http://wiki.ggbn.org/ggbn/ABS_Fact_Sheet_and_Answers_to_Frequently_Asked_Questions ABS wikipage]. A PDF version can be downloaded through our document library, [https://library.ggbn.org/share/s/SbIq7Y8xSDephsWxKTo6uA ABS Fact Sheet and FAQ].
| |
| − | | |
| − | [[File:ABS_FAQ.jpg|center|300px]]
| |
| − | | |
| − | =02 May 2017 - GGBN Asian Regional Workshop (July 21-22), updates and RSVP deadline extended to May 31=
| |
| − | | |
| − | The GGBN Asian Regional Workshop page has recently been updated with information on the workshop program, travel support, and accommodation. The RSVP deadline has been extended to May 31st.
| |
| − | | |
| − | See, https://meetings.ggbn.org/conference/ggbn/2017ws-as/
| |
| − | | |
| − | We hope that many of you will be able to join us. Please don’t hesitate to contact us if you have any questions. We look forward to welcoming you to the China National Genebank in Shenzhen,China!
| |
| − | | |
| − | =26. April 2017 - Job Openings at Natural History Museum, United Kingdom=
| |
| − | | |
| − | The Natural History Museum in London, England is pleased to announce two open positions, 1) Head, Molecular Biology Laboratories and 2) Bioinformatics Manager.
| |
| − | | |
| − | | |
| − | 1) Head, Molecular Biology Laboratories
| |
| − | | |
| − | The museum seeks to recruit an experienced scientific lead for the Molecular Biology Laboratories.
| |
| − | Forming one division within the museum’s Core Research Laboratories, the Molecular Biology Labs actively contribute to research in biological diversity. The successful candidate is expected to have a strong interest in the application of molecular methods across a broad taxonomic range, including zoological, botanical, microbiology or entomological sciences. There will also be the opportunity to contribute to the further development of phylogenetic, genomic and bioinformatics research across the life sciences at the NHM.
| |
| − | | |
| − | You will provide scientific lead and expertise to NHM research staff, curators and students to maximise impact and efficiency of scientific discovery and delivery from the Molecular Biology Labs.
| |
| − | | |
| − | [[File:Advert_Head_Molecular_Biology_Laboratories.docx]]
| |
| − | | |
| − | 2) Bioinformatics Manager
| |
| − | | |
| − | The Bioinformatics Manager will build and maintain the bioinformatics infrastructure to facilitate NHM research in molecular evolution and genomics, by curating sequencing data, by assessing, improving, and using bioinformatics processes, and by curating and communicating current best practice.
| |
| − | | |
| − | [[File:Advert_Bioinformatics_Manager.docx]]
| |
| − | | |
| − | Please complete your application online in NHM's recruitment portal:
| |
| − | | |
| − | https://careers.nhm.ac.uk
| |
| − | | |
| − | The Natural History Museum is one of the world’s leading museums, internationally recognised for its dual role as a centre of excellence in scientific research and as a leader in the presentation of natural history through exhibitions, public programmes, publications and the web. For more information on the Natural History Museum, please visit http://www.nhm.ac.uk/
| |
| − | | |
| − | [[File:NHM_earth_logo.jpg|center|300px]]
| |
| − | | |
| − | =05. April 2017 - GGBN March 2017 newsletter now available=
| |
| − | | |
| − | [[File:March2017Newsletter.jpg|center|300px]]
| |
| − | | |
| − | [https://library.ggbn.org/share/s/-8XTXFROQwekwgU7gK6n-Q The GGBN March 2017 Newsletter]
| |
| − | is now available through the GGBN Document Library.
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| − | Document library user accounts can be requested by e-mailing the document library team (library@ggbn.org)
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| − | =03. April 2017 - Biodiversity Research and Teaching Collections at Texas A&M University joins GGBN=
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| − | [[File:TexasAandMLogo.jpg|center|300px]]
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| − | We are pleased to announce that the Biodiversity Research and Teaching Collections at Texas A&M University has joined GGBN as its 59th member. The collection houses 15,046 tissue samples representative of 1,523 species.
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| − | For more information please visit the [http://brtc.tamu.edu/ Biodiversity Research and Teaching Collections at Texas A&M University website].
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| − | =27. March 2017 - Bishop Museum joins GGBN=
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| − | [[File:Bishop_Museum_Logo.jpg|center|300px]]
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| − | We are pleased to announce that the Bishop Museum has joined GGBN as its 58th member. The collection represents a little less than 100 individual DNA samples and 15,160 tissue samples representative of 2,317 species.
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| − | For more information on the Bishop Museum, please visit http://www.bishopmuseum.org/
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| − | =02. March 2017- GGBN/CETAF/SPNHC ABS Survey: Please participate by 23 March 2017=
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| − | The Global Genome Biodiversity Network (GGBN, http://www.ggbn.org), the Consortium of European Taxonomic Facilities (CETAF, http://cetaf.org/) and the Society for the Preservation of Natural History Collections (SPNHC, http://www.spnhc.org/) are collaborating to support their member organizations’ compliance with Access and Benefit Sharing (ABS) legislation in their own and other countries, including with the Nagoya Protocol (NP) where this is required. Both GGBN and CETAF have developed Material Transfer Agreements (MTA), Codes of Conduct and Best Practice guidance for members’ use. All three organizations have developed either ABS wiki pages (SPNHC and CETAF) or a working library of resources on the NP as part of a larger document library on biodiversity biobanking (GGBN). This survey is a new collaborative effort by the three organizations that will guide their future efforts concerning ABS.
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| − | Purpose of the Survey:
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| − | This survey is designed to gather your feedback concerning the use of existing information resources for responding to ABS and NP requirements by your institution. We anticipate using the survey results to improve these resources and develop new ones that will address your unmet needs. The survey results will be available to the GGBN, CETAF and SPNHC points of contact who have participated in developing the survey. Your response will be confidential; the GGBN Secretariat will be collating the data and that will be the only office to see your name associated with your response. Survey results will be made available through the GGBN, CETAF and SPNHC websites.
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| − | We anticipate that this survey will take less than 30 minutes of your time. We would greatly appreciate your honest and specific feedback by March 23, so that we can make timely progress on meeting your needs.
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| − | Link to survey: https://www.surveymonkey.com/r/D7HNR99
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| − | =01. March 2017- Denver Botanic Gardens joins GGBN=
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| − | [[File:DBG_logo.png|center|300px]]
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| − | We are pleased to announce that the Denver Botanic Gardens has joined GGBN as its 57th member. The collection represents 8,000 individual DNA samples and 1,945 tissue samples representative of 82 species.
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| − | For more information on the Denver Botanic Gardens, please visit: http://www.botanicgardens.org/
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| − | =02. February 2017 - GGBN ABS Guidance now on Access and Benefit-Sharing Clearing-House=
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| − | We are happy to announce that GGBN's guidance materials on Access and Benefit Sharing are now available through the ABS Clearing-House as reference records.
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| − | Open access to biodiversity research data and corresponding specimens in repositories is vital for basic non-commercial biological science and essential to support the objectives of the Convention on Biological Diversity. GGBN Member institutions commit themselves to acquiring, using and managing genetic resources in compliance with international conventions, and national laws and regulations. Accordingly, GGBN has developed Material Transfer Agreements, Code of Conduct and Best Practice guidance documents for Members’ use.
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| − | To access these documents on the ABS Clearing-House, please visit: https://absch.cbd.int/search
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| − | =26. January 2017 - GGBN Document Library Survey: please participate by 2 March 2017=
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| − | In an effort to better serve the needs of the biodiversity biobanking community, we are kindly requesting your feedback on the GGBN Document Library. Please take a few minutes to fill out our survey at https://www.surveymonkey.com/r/documentlibrary. Your feedback will help us streamline and improve the library in order to better meet the needs of its users.
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| − | As many of you are aware, GGBN in collaboration with the European, Middle Eastern & African Society for Biopreservation and Biobanking (ESBB) is developing a knowledge exchange platform for biodiversity biobanks, researchers and institutions through an online document library that will link to other online biorepository resources. This password-protected resource allows users to perform full text searches, tag publications, and browse information by category and tag. More information about the GGBN / ESBB Document Library can be found at http://wiki.ggbn.org/ggbn/Library
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| − | User accounts can be requested by e-mailing the document library team (library@ggbn.org)
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| − | [[File:GGBN_Doc_Image.jpg|center|300px]]
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| − | =17. January 2017 - GGBN-GGI Awards Program: Call for Proposals=
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| − | We are happy to announce the new GGBN-GGI Awards Program, which provides funding for projects that support the discoverability of new genetic collections through the Global Genome Biodiversity Network's Data Portal. The submission deadline for proposals this year is 1 May 2017. The proposal review committee will consider requests for up to 30,000 USD with clearly articulated budget justifications. All data from funded projects must be made available online on the GGBN Portal before 15 May 2018.
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| − | For information on how to apply, please see: http://wiki.ggbn.org/ggbn/Global_Genome_Biodiversity_Network-Global_Genome_Initiative_Awards_Program
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| − | =17. January 2017 - GGBN North American Regional Workshop (April 11-13), updates and RSVP by February 3rd=
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| − | The GGBN North American Regional Workshop page has recently been updated with information on the workshop program, travel support, and accommodation. The RSVP deadline has been extended to February 3rd.
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| − | See, https://meetings.ggbn.org/conference/ggbn/2017ws-na/
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| − | We hope that many of you will be able to join us. Please don’t hesitate to contact us if you have any questions. We look forward to welcoming you to the Smithsonian Institution’s National Museum of Natural History in Washington, DC!
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| − | =09. January 2017 - Museum of Comparative Zoology, Harvard University joins GGBN=
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| − | [[File:MCZ_Logo_4d.jpg|center|300px]]
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| − | We are pleased to announce that the Museum of Comparative Zoology, Harvard University has joined GGBN as our 56th member. The MCZ contains over 21-million specimens in ten research collections which comprise one of the world's richest and most varied resources for studying the diversity of life. The museum serves as the primary repository for zoological specimens collected by past and present Harvard faculty-curators, staff and associates conducting research around the world.
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| − | For more information about the MCZ, please visit: http://mcz.harvard.edu/collections/
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| | =News Archive= | | =News Archive= |
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| | Older news can be found in the GGBN [[News Archive]]. | | Older news can be found in the GGBN [[News Archive]]. |
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| | + | [[category: Help]] |
| | + | [[category: News]] |
The Earth BioGenome Project (EBP) Sample Collection and Processing subcommittee has updated their guidance on all things you need to think about when collecting and preparing specimens that will be used to generate high quality reference genomes. Check it out here!
We are excited to announce that Universidad Autónoma de Aguascalientes (UAA) has published data for the first time through GGBN! There are 2,000 botanical DNA and tissue samples collected in Central Mexico now available online. Check it out here!
Slides from the SPNHC-TDWG 2024 Conference session on "Biodiversity Biobanking Network GGBN: A global infrastructure for molecular collections" are now available on the GGBN document library. Check it out now!
We are excited share the latest edition of the GGBN Newsletter is now available! Within the 2024 GGBN newsletter you'll find all the highlights, updates, and events that have shaped our community over the past year. We hope you enjoy this newsletter!
We are pleased to announce Museo Nacional de Ciencias Naturales (MNCN) has joined GGBN! Museo Nacional de Ciencias Naturales is located in Madrid, Spain.
Both parts of the GGBN, the European Reference Genome Atlas (ERGA) and the Earth BioGenome Project (EBP) series focused on ABS - Nagoya Protocol and DSI are now uploaded on YouTube! Check it out here!
We're happy to announce that GGBN and European Reference Genome Atlas (ERGA) with the support of Digital Sequence Information (DSI) network are organizing a two-part webinar series focused on ABS (Access and Benefit Sharing), the Nagoya Protocol and DSI this April. Join us by filling the registration form here! Spots are limited.
We are pleased to announce the Royal Belgian Institute of Natural Sciences (RBINS) has joined GGBN! Located in Brussels, Belgium, the Royal Belgian Institute of Natural Sciences has 6,000 DNA samples, 6,500 tissue samples, and 38,000 specimens in their collections.
The fourth (and last) publication of the GGBN-led SYNTHESYS+ work package NA3: "Molecular collections in the age of genomics – standards &
processes" has been released! They are now posted to the GGBN Document Library. Click here to take a look!
We are excited to announce that the GGBN December 2023 Report is now available! This report highlights GGBN contributions, conferences, online discoverability and more from the past year. Head to the GGBN Document Library to take a look!
We are excited to announce the organizations who provided data for the first time in 2023: CMN, Ottawa, Canadian Museum of Nature, INRAE, Paris, National Institute of Research for Agriculture, Food and Environment, HNT, San Marino, The Huntington, and UNAL, Bogota, Universidad Nacional de Colombia / National University of Colombia.
The 2023 GGBN International Conference presentations are now available to watch on our YouTube page here! Check out some of the amazing talks from the conference!
We are happy to announce the South African National Biodiversity Institute and Biodiversity Biobanks South Africa as the host for the 2025 GGBN Conference in Cape Town, South Africa! Learn more about the institute here
The 2023 GGBN International Conference will now be hybrid for those who want to join via Zoom! Virtual participants can register for $50 on Etix. There is also still time to register for those who want to attend the conference in person! Click HERE to register.
We are still accepting abstracts for the upcoming GGBN International Conference on Biodiversity Biobanking, taking place 17-20 October 2023 in Aguascalientes, Mexico. Please see the latest conference announcement attached for session details.
Important deadlines:
General registration closes August 31st, late registration is open from September 1-October 1.
The last day to submit your abstracts is August 31st.
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