Search DNA Data

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Revision as of 11:19, 20 May 2011 by Hl (talk | contribs) (Search and Edit Tool)
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Search and Edit Tool

Main menu

This feature enables to search and edit specific specimen data. You can either search for a specific individual entering a unique ID or you can use taxonomic information or collection details to get a list of all entries matching your request. You can then choose a particular individual from the list appearing and change or add its information details. This might be necessary when the taxonomy has changed or if you want to add information on newly amplified fragments.

Once you have successfully logged in, click “Search”.

Specimen Details

Here you can either use taxonomic information or collection details to search for specific specimens. Using other information instead of a unique UnitID, you might deliver several hits. If you get a large number of results, the appearing list can be sorted by 'Voucher ID/ Specimen', 'No Collection', 'Institution' or 'Taxon'.

If you click on one of the hits you will get back to the data input form and can review all data for this particular voucher, and by clicking on the 'Edit Dataset' button make changes on any entries you want to change. By then clicking on 'Save Specimen' the previous data will be overwrited with the new information.

Search Mask
DNA and Tissue Data Explanation Pre-defined Example
Specimen Number/UnitID Unique identifier for the specimen No ZFMK-DNA ColCar 0399
Specimen database Database were the specimen is stored Yes Biodat
Identifications      
Higher Taxon Taxonomic details No Carabidae
Taxon Name Genus and/or species name No Carabus Archicarabus nemoralis
Collection Info      
Country Country were the specimen was collected   Germany
Country ISO Code ISO Code of this country Yes DE
Continent/Ocean - No Europe
Locality Region were the specimen was collected No Fehmahrn
Coordinates (Lat - Lon): See comments No 54.4666666700 - 11.1166666700
Collector(s) - No K. Hanning
Collection Date Date of collection;YYYY-MM-DD No -
Collector's Number See comments No -

Comments on specimen details

Country ISO code
The International Organization for Standardization (ISO) has defined individual ISO codes for each country. The two-letter code should be provided here (list of the specific ISO codes for each country).

Coordinates
If available, the respective locality coordinates can be provided here. Coordinates must be enterd in decimal degrees (Coordinate converter).

Collector's Number
The original identifier or code from the providing collecter might be different from the specimen UnitID of the electronic database. If known, it can be entered here.

DNA Details

It is also possible to search for details on DNA information of specimen voucher. The search fields here similar to those of the Input Tool. Explanations and comments to the specific fields are given here.