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Difference between revisions of "GGBN DNA Cloning Vocabulary"
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(Created page with "<div id="wikinote">Principal usage: The GGBN DNA Cloning Vocabulary is meant to be used with a 1:many relation for 1 DNA record. This is to cover all DNA cloning facts done wi...") |
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<div id="wikinote">Principal usage: The GGBN DNA Cloning Vocabulary is meant to be used with a 1:many relation for 1 DNA record. This is to cover all DNA cloning facts done with a single DNA sample. Within a Darwin Core-Archive implementation it has to be used with the new defined Material Sample Core (not the Occurrence Core). Within ABCD please use the [http://data.ggbn.org/schemas/ggbn/terms/ABCDGGBN.html ABCDGGBN] implementation.</div> | <div id="wikinote">Principal usage: The GGBN DNA Cloning Vocabulary is meant to be used with a 1:many relation for 1 DNA record. This is to cover all DNA cloning facts done with a single DNA sample. Within a Darwin Core-Archive implementation it has to be used with the new defined Material Sample Core (not the Occurrence Core). Within ABCD please use the [http://data.ggbn.org/schemas/ggbn/terms/ABCDGGBN.html ABCDGGBN] implementation.</div> | ||
| − | ''Description:'' These terms have been developed for specific GGBN purposes but can be used in any other molecular context. The DNA cloning vocabulary terms are specific to the aspects of DNA cloning. It also contains terms from MIxS. | + | ''Description:'' These terms have been developed for specific GGBN purposes but can be used in any other molecular context. The DNA cloning vocabulary terms are specific to the aspects of DNA cloning. It also contains terms from MIxS. |
This is a collection within the [[GGBN_Data_Standard_v1 | GGBN Data Standard]]. It contains the following concepts: | This is a collection within the [[GGBN_Data_Standard_v1 | GGBN Data Standard]]. It contains the following concepts: | ||
<div style="margin:0 0 0 2em;"> | <div style="margin:0 0 0 2em;"> | ||
| − | '''By label:''' [[ | + | '''By label:''' [[ggbn:cloneStrain|Clone Strain]] • [[ggbn:cloningDate|Cloning Date]] • [[ggbn:cloningMethod|Cloning Method]] • [[ggbn:cloningStaff|Cloning Staff]] • [[ggbn:plasmid|Plasmid]] • [[ggbn:primerName|Primer Name]] • [[ggbn:primerNameForward|Primer Name (Forward)]] • [[ggbn:primerNameReverse|Primer Name (Reverse)]] • [[ggbn:primerReferenceCitation|Primer Reference Citation]] • [[ggbn:primerReferenceCitationForward|Primer Reference Citation (Forward)]] • [[ggbn:primerReferenceCitationReverse|Primer Reference Citation (Reverse)]] • [[ggbn:primerReferenceLink|Primer Reference Link]] • [[ggbn:primerReferenceLinkForward|Primer Reference Link (Forward)]] • [[ggbn:primerReferenceLinkReverse|Primer Reference Link (Reverse)]] • [[ggbn:primerSequence|Primer Sequence]] • [[ggbn:primerSequenceForward|Primer Sequence (Forward)]] • [[ggbn:primerSequenceReverse|Primer Sequence (Reverse)]] • [[mixs:lib_const_meth|library construction method]] • [[mixs:lib_reads_seqd|library reads sequenced]] • [[mixs:lib_screen|library screening strategy]] • [[mixs:lib_size|library size]] • [[mixs:lib_vector|library vector]] |
</div> | </div> | ||
<div style="margin:0 0 0 2em;"> | <div style="margin:0 0 0 2em;"> | ||
| − | '''By concept name:''' [[ | + | '''By concept name:''' [[ggbn:cloneStrain|ggbn:cloneStrain]] • [[ggbn:cloningDate|ggbn:cloningDate]] • [[ggbn:cloningMethod|ggbn:cloningMethod]] • [[ggbn:cloningStaff|ggbn:cloningStaff]] • [[ggbn:plasmid|ggbn:plasmid]] • [[ggbn:primerName|ggbn:primerName]] • [[ggbn:primerNameForward|ggbn:primerNameForward]] • [[ggbn:primerNameReverse|ggbn:primerNameReverse]] • [[ggbn:primerReferenceCitation|ggbn:primerReferenceCitation]] • |
| − | [[ | + | [[ggbn:primerReferenceLinkForward|ggbn:primerReferenceLinkForward]] • [[ggbn:primerReferenceLinkReverse|ggbn:primerReferenceLinkReverse]] • [[ggbn:primerSequence|ggbn:primerSequence]] • [[ggbn:primerSequenceForward|ggbn:primerSequenceForward]] • [[ggbn:primerSequenceReverse|ggbn:primerSequenceReverse]] • [[mixs:lib_const_meth|mixs:lib const meth]] • [[mixs:lib_reads_seqd|mixs:lib reads seqd]] • [[mixs:lib_screen|mixs:lib screen]] • [[mixs:lib_size|mixs:lib size]] • [[mixs:lib_vector|mixs:lib vector]] |
</div> | </div> | ||
Latest revision as of 11:53, 29 January 2025
Principal usage: The GGBN DNA Cloning Vocabulary is meant to be used with a 1:many relation for 1 DNA record. This is to cover all DNA cloning facts done with a single DNA sample. Within a Darwin Core-Archive implementation it has to be used with the new defined Material Sample Core (not the Occurrence Core). Within ABCD please use the ABCDGGBN implementation.
Description: These terms have been developed for specific GGBN purposes but can be used in any other molecular context. The DNA cloning vocabulary terms are specific to the aspects of DNA cloning. It also contains terms from MIxS.
This is a collection within the GGBN Data Standard. It contains the following concepts:
By label: Clone Strain • Cloning Date • Cloning Method • Cloning Staff • Plasmid • Primer Name • Primer Name (Forward) • Primer Name (Reverse) • Primer Reference Citation • Primer Reference Citation (Forward) • Primer Reference Citation (Reverse) • Primer Reference Link • Primer Reference Link (Forward) • Primer Reference Link (Reverse) • Primer Sequence • Primer Sequence (Forward) • Primer Sequence (Reverse) • library construction method • library reads sequenced • library screening strategy • library size • library vector
By concept name: ggbn:cloneStrain • ggbn:cloningDate • ggbn:cloningMethod • ggbn:cloningStaff • ggbn:plasmid • ggbn:primerName • ggbn:primerNameForward • ggbn:primerNameReverse • ggbn:primerReferenceCitation • ggbn:primerReferenceLinkForward • ggbn:primerReferenceLinkReverse • ggbn:primerSequence • ggbn:primerSequenceForward • ggbn:primerSequenceReverse • mixs:lib const meth • mixs:lib reads seqd • mixs:lib screen • mixs:lib size • mixs:lib vector
