DwC: Difference between revisions
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Please see also [http://rs.gbif.org/sandbox/extension/] for xml files used by IPT. Full support of all GGBN extensions will be available with next IPT release planned for November 2014. | Please see also [http://rs.gbif.org/sandbox/extension/] for xml files used by IPT. Full support of all GGBN extensions will be available with next IPT release planned for November 2014. | ||
To use Material Sample as Core a manual change in configuration of IPT is required. Add the following 2 lines to $IPT_DATA_DIR/config/ipt.properties | <div id="wikinote">To use Material Sample as Core a manual change in configuration of IPT is required. Add the following 2 lines to $IPT_DATA_DIR/config/ipt.properties | ||
<code>ipt.core_rowTypes=http://rs.tdwg.org/dwc/terms/MaterialSample | <code>ipt.core_rowTypes=http://rs.tdwg.org/dwc/terms/MaterialSample | ||
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ipt.core_idTerms=http://rs.tdwg.org/dwc/terms/materialSampleID</code> | ipt.core_idTerms=http://rs.tdwg.org/dwc/terms/materialSampleID</code> | ||
See also [https://code.google.com/p/gbif-providertoolkit/wiki/IPT2Core here] | See also [https://code.google.com/p/gbif-providertoolkit/wiki/IPT2Core here] </div> | ||
Issues that apeared during testing, in the meanwhile fixed by GBIF developers: | |||
*[https://code.google.com/p/gbif-registry/source/detail?r=3626 changing keyword in GGBN classes] | *[https://code.google.com/p/gbif-registry/source/detail?r=3626 changing keyword in GGBN classes] | ||
Revision as of 14:14, 12 September 2014
Currently only ABCD and BioCASe can be used for providing data to our data portal. Since several GGBN partners use IPT and DarwinCore-Archive to provide their data to GBIF we now are going to create and test a GGBN extension for DarwinCore-Archive. We plan to enable the use of DarwinCore-Archive in parallel.
GGBN Data Standard
ABCDDNA has been reviewed several times and is now substituted by the GGBN Data Standard. Find out more
GGBN Data Standard and Darwin Core-Archive
This is the current (09/2014) model for testing GGBN Data Standard with IPT:
Please see also [1] for xml files used by IPT. Full support of all GGBN extensions will be available with next IPT release planned for November 2014.
ipt.core_rowTypes=http://rs.tdwg.org/dwc/terms/MaterialSample
ipt.core_idTerms=http://rs.tdwg.org/dwc/terms/materialSampleID
Issues that apeared during testing, in the meanwhile fixed by GBIF developers:
- changing keyword in GGBN classes
- meta.xml syntax error
- problem with same name for core and extension (Material Sample)
Workshops
- TDWG 2013, Florence: Create and Implement a draft DarwinCore DNA and Tissue extension
- TDWG 2013, Florence: Darwin Core Archives: beyond star schema
- 2013, Copenhagen: Discussing the use of DarwinCore and DarwinCore-Archive for MaterialSample-related records
- TDWG 2012, Beijing: Discussing a DarwinCore DNA and Tissue extension for GGBN
- 2012, Oxford: Hackathon-Workshop on Darwin Core and MIxS Standards Alignment (Meeting report: SIGS (2012) 7:166-170 DOI:10.4056/sigs.3166513)