User contributions
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- 11:10, 29 January 2025 (diff | hist) . . (+16) . . N Template:Pagetitle (Created page with "{{FULLPAGENAME}}") (current)
- 11:08, 29 January 2025 (diff | hist) . . (+62) . . MediaWiki:Sitenotice
- 11:05, 29 January 2025 (diff | hist) . . (+84) . . MediaWiki:Sitenotice
- 11:03, 29 January 2025 (diff | hist) . . (+7) . . N MediaWiki:Sitenotice (Created page with "Test123")
- 09:21, 29 January 2025 (diff | hist) . . (-811) . . Meetings and Conferences
- 21:38, 28 January 2025 (diff | hist) . . (-22) . . GGBN Data Standard v1 (→GGBN Preparation Vocabulary)
- 21:38, 28 January 2025 (diff | hist) . . (+1) . . GGBN Data Standard v1 (→GGBN Preparation Vocabulary)
- 21:34, 28 January 2025 (diff | hist) . . (+22) . . GGBN Data Standard v1 (→GGBN Preparation Vocabulary)
- 17:35, 28 January 2025 (diff | hist) . . (0) . . Mixs:sop (current)
- 17:35, 28 January 2025 (diff | hist) . . (+581) . . N Mixs:sop (Created page with "{{DISPLAYTITLE:mixs:sop}} {{mixsconcept|label=relevant standard operating procedures|definition=Standard operating procedures used in assembly and/or annotation of genomes, me...")
- 17:35, 28 January 2025 (diff | hist) . . (-2) . . Mixs:seq quality check (current)
- 17:34, 28 January 2025 (diff | hist) . . (+746) . . N Mixs:seq quality check (Created page with "{{DISPLAYTITLE:mixs:seq_quality_check}} {{mixsconcept|label=sequence quality check|definition=Indicate if the sequence has been called by automatic systems (none) or undergone...")
- 17:34, 28 January 2025 (diff | hist) . . (+628) . . N Mixs:mid (Created page with "{{DISPLAYTITLE:mixs:mid}} {{mixsconcept|label=multiplex identifiers|definition=Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to specifically tag uniqu...") (current)
- 17:33, 28 January 2025 (diff | hist) . . (+713) . . N Mixs:finishing strategy (Created page with "{{DISPLAYTITLE:mixs:finishing_strategy}} {{mixsconcept|label=finishing strategy|definition=Was the genome project intended to produce a complete or draft genome, Coverage, the...") (current)
- 17:33, 28 January 2025 (diff | hist) . . (+901) . . N Mixs:chimera check (Created page with "{{DISPLAYTITLE:mixs:chimera_check}} {{mixsconcept|label=chimera check|definition=A chimeric sequence, or chimera for short, is a sequence comprised of two or more phylogenetic...") (current)
- 17:33, 28 January 2025 (diff | hist) . . (+728) . . N Mixs:assembly (Created page with "{{DISPLAYTITLE:mixs:assembly}} {{mixsconcept|label=assembly|definition=How was the assembly done (e.g. with a text based assembler like phrap or a flowgram assembler); estimat...") (current)
- 17:33, 28 January 2025 (diff | hist) . . (+594) . . N Mixs:annot source (Created page with "{{DISPLAYTITLE:mixs:annot_source}} {{mixsconcept|label=annotation source|definition=For cases where annotation was provided by a community jamboree or model organism database...") (current)
- 17:32, 28 January 2025 (diff | hist) . . (-4) . . Mixs:adapters (current)
- 17:31, 28 January 2025 (diff | hist) . . (-41) . . Template:Mixsconcept (current)
- 17:31, 28 January 2025 (diff | hist) . . (+615) . . N Mixs:adapters (Created page with "{{DISPLAYTITLE:mixs:adapters}} {{mixsconcept|label=adapters|definition=Adapters provide priming sequences for both amplification and sequencing of the sample-library fragments...")
- 17:31, 28 January 2025 (diff | hist) . . (+614) . . N Template:Mixsconcept (Created page with "{| style="width:100%;" |- style="vertical-align:top;" | style="width:50%;" | {| class="wikitable" !colspan="2"|Concept |- | '''Label''' || {{{label|}}} |- | '''Definition''' |...")
- 17:29, 28 January 2025 (diff | hist) . . (+731) . . N Ggbn:purificationMethod (Created page with "{{DISPLAYTITLE:ggbn:purificationMethod}} {{concept|label=Purification Method (DNA or Amplification)|definition=Method or protocol used for secundary purification of already ex...") (current)
- 17:28, 28 January 2025 (diff | hist) . . (+648) . . N Ggbn:primerSequenceReverse (Created page with "{{DISPLAYTITLE:ggbn:primerSequenceReverse}} {{concept|label=Primer Sequence (Reverse)|definition=DNA sequence of the primer (A,T,G,C; 5' to 3')|notes=only for Darwin Core-Arch...") (current)
- 17:28, 28 January 2025 (diff | hist) . . (+648) . . N Ggbn:primerSequenceForward (Created page with "{{DISPLAYTITLE:ggbn:primerSequenceForward}} {{concept|label=Primer Sequence (Forward)|definition=DNA sequence of the primer (A,T,G,C; 5' to 3')|notes=only for Darwin Core-Arch...") (current)
- 17:28, 28 January 2025 (diff | hist) . . (+672) . . N Ggbn:primerSequence (Created page with "{{DISPLAYTITLE:ggbn:primerSequence}} {{concept|label=Primer Sequence|definition=DNA sequence of the primer (A,T,G,C; 5' to 3')|notes=can be used for ABCD implementation; for D...") (current)
- 17:27, 28 January 2025 (diff | hist) . . (+672) . . N Ggbn:primerReferenceLinkReverse (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceLinkReverse}} {{concept|label=Primer Reference Link (Reverse)|definition=Link to the first reference of the reverse primer|notes=only for Da...") (current)
- 17:27, 28 January 2025 (diff | hist) . . (+672) . . N Ggbn:primerReferenceLinkForward (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceLinkForward}} {{concept|label=Primer Reference Link (Forward)|definition=Link to the first reference of the forward primer|notes=only for Da...") (current)
- 17:27, 28 January 2025 (diff | hist) . . (+694) . . N Ggbn:primerReferenceLink (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceLink}} {{concept|label=Primer Reference Link|definition=Link to the first reference of the primer|notes=can be used for ABCD implementation;...") (current)
- 17:26, 28 January 2025 (diff | hist) . . (+676) . . N Ggbn:primerReferenceCitationReverse (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceCitationReverse}} {{concept|label=Primer Reference Citation (Reverse)|definition=First reference of the reverse primer|notes=only for Darwin...") (current)
- 17:26, 28 January 2025 (diff | hist) . . (+676) . . N Ggbn:primerReferenceCitationForward (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceCitationForward}} {{concept|label=Primer Reference Citation (Forward)|definition=First reference of the forward primer|notes=only for Darwin...") (current)
- 17:26, 28 January 2025 (diff | hist) . . (+701) . . N Ggbn:primerReferenceCitation (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceCitation}} {{concept|label=Primer Reference Citation|definition=First reference of the primer|notes=can be used for ABCD implementation; for...") (current)
- 17:25, 28 January 2025 (diff | hist) . . (+653) . . N Ggbn:primerNameReverse (Created page with "{{DISPLAYTITLE:ggbn:primerNameReverse}} {{concept|label=Primer Name (Reverse)|definition=Name of primer used for this amplification, cloning, or single read|notes=only for Dar...") (current)
- 17:25, 28 January 2025 (diff | hist) . . (+653) . . N Ggbn:primerNameForward (Created page with "{{DISPLAYTITLE:ggbn:primerNameForward}} {{concept|label=Primer Name (Forward)|definition=Name of primer used for this amplification, cloning, or single read|notes=only for Dar...") (current)
- 17:24, 28 January 2025 (diff | hist) . . (+737) . . N Ggbn:primerName (Created page with "{{DISPLAYTITLE:ggbn:primerName}} {{concept|label=Primer Name|definition=Name of primer used for this amplification, cloning, or single read|notes=can be used for ABCD implemen...") (current)
- 17:23, 28 January 2025 (diff | hist) . . (+450) . . N Ggbn:marker (Created page with "{{DISPLAYTITLE:ggbn:marker}} {{concept|label=Marker|definition=Genetic locus/marker or DNA fragment amplified by PCR|example=COI, rbcL|uri=http://data.ggbn.org/schemas/ggbn/te...") (current)
- 17:21, 28 January 2025 (diff | hist) . . (+460) . . N Ggbn:markerSubfragment (Created page with "{{DISPLAYTITLE:ggbn:markerSubfragment}} {{concept|label=Marker Subfragment|definition=Name of subfragment of a gene or locus. Important to e.g. identify special regions on mar...") (current)
- 17:21, 28 January 2025 (diff | hist) . . (+514) . . N Ggbn:markerAccordance (Created page with "{{DISPLAYTITLE:ggbn:markerAccordance}} {{concept|label=Marker Accordance|definition=Result of comparison of two markers of two specimens or strains. Name or TAX-ID (NCBI) of c...") (current)
- 17:21, 28 January 2025 (diff | hist) . . (+363) . . N Ggbn:haplotype (Created page with "{{DISPLAYTITLE:ggbn:haplotype}} {{concept|label=Haplotype|definition=Name of the haplotype|example=H4, A23|uri=http://data.ggbn.org/schemas/ggbn/terms/haplotype|cardinality=0....") (current)
- 17:20, 28 January 2025 (diff | hist) . . (+375) . . N Ggbn:GC-content (Created page with "{{DISPLAYTITLE:ggbn:GC-content}} {{concept|label=Guanin-Cytosine content|definition=guanine-cytosine content in mol %|uri=http://data.ggbn.org/schemas/ggbn/terms/GC-content|ca...") (current)
- 17:20, 28 January 2025 (diff | hist) . . (+542) . . N Ggbn:geneticAccessionURI (Created page with "{{DISPLAYTITLE:ggbn:geneticAccessionURI}} {{concept|label=Genetic Accession URI|definition=URI of the related record in a public database (GenBank/DDBJ/EMBL record)|notes=this...") (current)
- 17:20, 28 January 2025 (diff | hist) . . (+488) . . N Ggbn:geneticAccessionNumber (Created page with "{{DISPLAYTITLE:ggbn:geneticAccessionNumber}} {{concept|label=Genetic Accession Number|definition=Definite number or ID under which the DNA sequence is deposited in a public da...") (current)
- 17:19, 28 January 2025 (diff | hist) . . (+452) . . N Ggbn:consensusSequenceLength (Created page with "{{DISPLAYTITLE:ggbn:consensusSequenceLength}} {{concept|label=Consensus Sequence Length|definition=Length of the consensus sequence (number of base pairs)|example=697, integer...") (current)
- 17:19, 28 January 2025 (diff | hist) . . (+502) . . N Ggbn:consensusSequenceChromatogramFileURI (Created page with "{{DISPLAYTITLE:ggbn:consensusSequenceChromatogramFileURI}} {{concept|label=Consensus Sequence Chromatogram URI|definition=Link to the chromatogram of the consensus sequence|ex...") (current)
- 17:18, 28 January 2025 (diff | hist) . . (+407) . . N Ggbn:consensusSequence (Created page with "{{DISPLAYTITLE:ggbn:consensusSequence}} {{concept|label=Consensus Sequence|definition=Consensus sequence derived from all individual sequences|uri=http://data.ggbn.org/schemas...") (current)
- 17:18, 28 January 2025 (diff | hist) . . (+516) . . N Ggbn:BOLDProcessID (Created page with "{{DISPLAYTITLE:ggbn:BOLDProcessID}} {{concept|label=BOLD Process ID|definition=Definite number or ID under which the DNA sequence is deposited in the BOLD database|notes=often...") (current)
- 17:17, 28 January 2025 (diff | hist) . . (+406) . . N Ggbn:barcodeSequence (Created page with "{{DISPLAYTITLE:ggbn:barcodeSequence}} {{concept|label=Barcode Sequence|definition=DNA Barcode sequence (part or 100% of the consensus sequence)|uri=http://data.ggbn.org/schema...") (current)
- 17:16, 28 January 2025 (diff | hist) . . (-1,580) . . GGBN Data Standard v1 (→GGBN Amplification Vocabulary)
- 17:11, 28 January 2025 (diff | hist) . . (+1) . . Ggbn:amplificationSuccess (current)
- 17:10, 28 January 2025 (diff | hist) . . (-32) . . Ggbn:amplificationSuccess
- 17:10, 28 January 2025 (diff | hist) . . (+512) . . N Ggbn:amplificationSuccessDetails (Created page with "{{DISPLAYTITLE:ggbn:amplificationSuccessDetails}} {{concept|label=Amplification Success Details|definition=Details about the amplification, e.g. including why it has failed|no...") (current)
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