GGBN Material Sample Vocabulary

Principal usage: The GGBN Material Sample Vocabulary is meant to be used with a 1:1 relation for 1 tissue, or DNA record. Within a Darwin Core-Archive implementation it has to be used with the new defined Material Sample Core (not the Occurrence Core). Within ABCD please use the ABCDGGBN implementation.

Description: These terms has been developed for specific GGBN purposes but can be used in other molecular context. The material sample vocabulary terms are specific to basic lab facts about a physical DNA or tissue sample. It also contains terms from MIxS.

This is a collection within the GGBN Data Standard. It contains the following concepts:

By label: Concentration (DNA) • DNA Melting Point • DNA-DNA Hybridization • High • Low • Material Sample Type • Medium • Method used for Determination of Concentration and Ratios of Absorbance (DNA) • Method used for Determination of Weight • Purification Method (DNA or Amplification) • Quality • Quality Check Date • Quality Remarks • Quality Vocabulary • Ratio of Absorbance 260/230 (DNA) • Ratio of Absorbance 260/280 (DNA) • Sample Designation • Unit of Concentration (DNA) • Unit of Volume • Unit of Weight • Volume • Weight • estimated Size • sample size

By concept name: ggbn:DNADNAHybridization • ggbn:DNAMeltingPoint • ggbn:concentration • ggbn:concentrationUnit • ggbn:materialSampleType • ggbn:methodDeterminationConcentrationAndRatios • ggbn:methodDeterminationWeight • ggbn:purificationMethod • ggbn:quality • ggbn:qualityCheckDate • ggbn:qualityRemarks • ggbn:ratioOfAbsorbance260 230 • ggbn:ratioOfAbsorbance260 280 • ggbn:sampleDesignation • ggbn:volume • ggbn:volumeUnit • ggbn:weight • ggbn:weightUnit • ggbnvoc:high • ggbnvoc:low • ggbnvoc:medium • ggbnvoc:quality vocabulary • mixs:estimated size • mixs:samp size