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- 14:20, 29 January 2025 Mixs:lib size (hist) [503 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:lib_size}} {{mixsconcept|label=library size|definition=Total number of clones in the library prepared for the project|value=number of clones|requirements=X...")
- 14:19, 29 January 2025 Mixs:lib screen (hist) [644 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:lib_screen}} {{mixsconcept|label=library screening strategy|definition=Specific enrichment or screening methods applied before and/or after creating clone...")
- 14:19, 29 January 2025 Mixs:lib reads seqd (hist) [522 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:lib_reads_seqd}} {{mixsconcept|label=library reads sequenced|definition=Total number of clones sequenced from the library|value=number of reads sequenced|r...")
- 14:19, 29 January 2025 Mixs:lib const meth (hist) [561 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:lib_const_meth}} {{mixsconcept|label=library construction method|definition=Library construction method used for clone libraries|example=paired-end,single,...")
- 14:18, 29 January 2025 Ggbn:plasmid (hist) [351 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:plasmid}} {{concept|label=Plasmid|definition=Name of Plasmid used for sequencing|uri=http://data.ggbn.org/schemas/ggbn/terms/plasmid|cardinality=0..n (=opt...")
- 14:17, 29 January 2025 Ggbn:cloningStaff (hist) [402 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:cloningStaff}} {{concept|label=Cloning Staff|definition=Person or Institution who performed the cloning|example=Jane Doe, NMNH|uri=http://data.ggbn.org/sch...")
- 14:17, 29 January 2025 Ggbn:cloningMethod (hist) [374 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:cloningMethod}} {{concept|label=Cloning Method|definition=Method or protocol used for DNA cloning|uri=http://data.ggbn.org/schemas/ggbn/terms/cloningMethod...")
- 14:17, 29 January 2025 Ggbn:cloningDate (hist) [399 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:cloningDate}} {{concept|label=Cloning Date|definition=Date when the DNA cloning was carried out|example=2014-05-18, May 2013|uri=http://data.ggbn.org/schem...")
- 14:16, 29 January 2025 Ggbn:cloneStrain (hist) [361 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:cloneStrain}} {{concept|label=Clone Strain|definition=Name of the individual DNA clone|uri=http://data.ggbn.org/schemas/ggbn/terms/cloneStrain|cardinality=...")
- 17:35, 28 January 2025 Mixs:sop (hist) [581 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:sop}} {{mixsconcept|label=relevant standard operating procedures|definition=Standard operating procedures used in assembly and/or annotation of genomes, me...")
- 17:34, 28 January 2025 Mixs:seq quality check (hist) [744 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:seq_quality_check}} {{mixsconcept|label=sequence quality check|definition=Indicate if the sequence has been called by automatic systems (none) or undergone...")
- 17:34, 28 January 2025 Mixs:mid (hist) [628 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:mid}} {{mixsconcept|label=multiplex identifiers|definition=Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to specifically tag uniqu...")
- 17:33, 28 January 2025 Mixs:finishing strategy (hist) [713 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:finishing_strategy}} {{mixsconcept|label=finishing strategy|definition=Was the genome project intended to produce a complete or draft genome, Coverage, the...")
- 17:33, 28 January 2025 Mixs:chimera check (hist) [901 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:chimera_check}} {{mixsconcept|label=chimera check|definition=A chimeric sequence, or chimera for short, is a sequence comprised of two or more phylogenetic...")
- 17:33, 28 January 2025 Mixs:assembly (hist) [728 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:assembly}} {{mixsconcept|label=assembly|definition=How was the assembly done (e.g. with a text based assembler like phrap or a flowgram assembler); estimat...")
- 17:33, 28 January 2025 Mixs:annot source (hist) [594 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:annot_source}} {{mixsconcept|label=annotation source|definition=For cases where annotation was provided by a community jamboree or model organism database...")
- 17:31, 28 January 2025 Mixs:adapters (hist) [611 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:mixs:adapters}} {{mixsconcept|label=adapters|definition=Adapters provide priming sequences for both amplification and sequencing of the sample-library fragments...")
- 17:29, 28 January 2025 Ggbn:purificationMethod (hist) [731 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:purificationMethod}} {{concept|label=Purification Method (DNA or Amplification)|definition=Method or protocol used for secundary purification of already ex...")
- 17:28, 28 January 2025 Ggbn:primerSequenceReverse (hist) [648 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerSequenceReverse}} {{concept|label=Primer Sequence (Reverse)|definition=DNA sequence of the primer (A,T,G,C; 5' to 3')|notes=only for Darwin Core-Arch...")
- 17:28, 28 January 2025 Ggbn:primerSequenceForward (hist) [648 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerSequenceForward}} {{concept|label=Primer Sequence (Forward)|definition=DNA sequence of the primer (A,T,G,C; 5' to 3')|notes=only for Darwin Core-Arch...")
- 17:28, 28 January 2025 Ggbn:primerSequence (hist) [672 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerSequence}} {{concept|label=Primer Sequence|definition=DNA sequence of the primer (A,T,G,C; 5' to 3')|notes=can be used for ABCD implementation; for D...")
- 17:27, 28 January 2025 Ggbn:primerReferenceLinkReverse (hist) [672 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceLinkReverse}} {{concept|label=Primer Reference Link (Reverse)|definition=Link to the first reference of the reverse primer|notes=only for Da...")
- 17:27, 28 January 2025 Ggbn:primerReferenceLinkForward (hist) [672 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceLinkForward}} {{concept|label=Primer Reference Link (Forward)|definition=Link to the first reference of the forward primer|notes=only for Da...")
- 17:27, 28 January 2025 Ggbn:primerReferenceLink (hist) [694 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceLink}} {{concept|label=Primer Reference Link|definition=Link to the first reference of the primer|notes=can be used for ABCD implementation;...")
- 17:26, 28 January 2025 Ggbn:primerReferenceCitationReverse (hist) [676 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceCitationReverse}} {{concept|label=Primer Reference Citation (Reverse)|definition=First reference of the reverse primer|notes=only for Darwin...")
- 17:26, 28 January 2025 Ggbn:primerReferenceCitationForward (hist) [676 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceCitationForward}} {{concept|label=Primer Reference Citation (Forward)|definition=First reference of the forward primer|notes=only for Darwin...")
- 17:26, 28 January 2025 Ggbn:primerReferenceCitation (hist) [701 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerReferenceCitation}} {{concept|label=Primer Reference Citation|definition=First reference of the primer|notes=can be used for ABCD implementation; for...")
- 17:25, 28 January 2025 Ggbn:primerNameReverse (hist) [653 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerNameReverse}} {{concept|label=Primer Name (Reverse)|definition=Name of primer used for this amplification, cloning, or single read|notes=only for Dar...")
- 17:25, 28 January 2025 Ggbn:primerNameForward (hist) [653 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerNameForward}} {{concept|label=Primer Name (Forward)|definition=Name of primer used for this amplification, cloning, or single read|notes=only for Dar...")
- 17:24, 28 January 2025 Ggbn:primerName (hist) [737 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:primerName}} {{concept|label=Primer Name|definition=Name of primer used for this amplification, cloning, or single read|notes=can be used for ABCD implemen...")
- 17:23, 28 January 2025 Ggbn:marker (hist) [450 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:marker}} {{concept|label=Marker|definition=Genetic locus/marker or DNA fragment amplified by PCR|example=COI, rbcL|uri=http://data.ggbn.org/schemas/ggbn/te...")
- 17:21, 28 January 2025 Ggbn:markerSubfragment (hist) [460 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:markerSubfragment}} {{concept|label=Marker Subfragment|definition=Name of subfragment of a gene or locus. Important to e.g. identify special regions on mar...")
- 17:21, 28 January 2025 Ggbn:markerAccordance (hist) [514 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:markerAccordance}} {{concept|label=Marker Accordance|definition=Result of comparison of two markers of two specimens or strains. Name or TAX-ID (NCBI) of c...")
- 17:21, 28 January 2025 Ggbn:haplotype (hist) [363 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:haplotype}} {{concept|label=Haplotype|definition=Name of the haplotype|example=H4, A23|uri=http://data.ggbn.org/schemas/ggbn/terms/haplotype|cardinality=0....")
- 17:20, 28 January 2025 Ggbn:GC-content (hist) [375 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:GC-content}} {{concept|label=Guanin-Cytosine content|definition=guanine-cytosine content in mol %|uri=http://data.ggbn.org/schemas/ggbn/terms/GC-content|ca...")
- 17:20, 28 January 2025 Ggbn:geneticAccessionURI (hist) [542 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:geneticAccessionURI}} {{concept|label=Genetic Accession URI|definition=URI of the related record in a public database (GenBank/DDBJ/EMBL record)|notes=this...")
- 17:20, 28 January 2025 Ggbn:geneticAccessionNumber (hist) [488 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:geneticAccessionNumber}} {{concept|label=Genetic Accession Number|definition=Definite number or ID under which the DNA sequence is deposited in a public da...")
- 17:19, 28 January 2025 Ggbn:consensusSequenceLength (hist) [452 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:consensusSequenceLength}} {{concept|label=Consensus Sequence Length|definition=Length of the consensus sequence (number of base pairs)|example=697, integer...")
- 17:19, 28 January 2025 Ggbn:consensusSequenceChromatogramFileURI (hist) [502 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:consensusSequenceChromatogramFileURI}} {{concept|label=Consensus Sequence Chromatogram URI|definition=Link to the chromatogram of the consensus sequence|ex...")
- 17:18, 28 January 2025 Ggbn:consensusSequence (hist) [407 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:consensusSequence}} {{concept|label=Consensus Sequence|definition=Consensus sequence derived from all individual sequences|uri=http://data.ggbn.org/schemas...")
- 17:18, 28 January 2025 Ggbn:BOLDProcessID (hist) [516 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:BOLDProcessID}} {{concept|label=BOLD Process ID|definition=Definite number or ID under which the DNA sequence is deposited in the BOLD database|notes=often...")
- 17:17, 28 January 2025 Ggbn:barcodeSequence (hist) [406 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:barcodeSequence}} {{concept|label=Barcode Sequence|definition=DNA Barcode sequence (part or 100% of the consensus sequence)|uri=http://data.ggbn.org/schema...")
- 17:10, 28 January 2025 Ggbn:amplificationSuccessDetails (hist) [512 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:amplificationSuccessDetails}} {{concept|label=Amplification Success Details|definition=Details about the amplification, e.g. including why it has failed|no...")
- 17:09, 28 January 2025 Ggbn:amplificationSuccess (hist) [580 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:amplificationSuccess}} {{concept|label=Amplification Success|definition=true/false or yes/no whether the ampliciation was successful in general; highly rec...")
- 17:08, 28 January 2025 Ggbn:amplificationStaff (hist) [429 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:amplificationStaff}} {{concept|label=Amplification Staff|definition=Person or Institution who performed the amplification|example=Jon Doe, NMNH|uri=http://...")
- 10:52, 24 January 2025 Ggbn:amplificationMethod (hist) [460 bytes] WikiSysop (talk | contribs) (Created page with "{{DISPLAYTITLE:ggbn:amplificationMethod}} {{concept|label=Amplification Method|definition=Method used for amplification/PCR. |uri=http://data.ggbn.org/schemas/ggbn/terms/ampli...")
- 21:59, 23 January 2025 Ggbn:amplificationDate (hist) [473 bytes] WikiSysop (talk | contribs) (Created page with "{{concept|label=Amplification Date|definition=Date when the amplification was carried out|example=2008-10-17, May 2007|notes=freetext since mostly exact date is unknown|uri=ht...")
- 21:45, 23 January 2025 GGBN DNA Cloning Vocabulary (hist) [3,087 bytes] WikiSysop (talk | contribs) (Created page with "<div id="wikinote">Principal usage: The GGBN DNA Cloning Vocabulary is meant to be used with a 1:many relation for 1 DNA record. This is to cover all DNA cloning facts done wi...")
- 21:38, 23 January 2025 GGBN Amplification Vocabulary (hist) [5,484 bytes] WikiSysop (talk | contribs) (Created page with "<div id="wikinote">Principal usage: The GGBN Amplification Vocabulary is meant to be used with a 1:many relation for 1 DNA record. This is to cover all amplifications done wit...")
- 17:01, 14 January 2025 Citation and License (hist) [464 bytes] WikiSysop (talk | contribs) (Created page with "=How to cite us= GGBN (Eds.) 2011+ (continuously updated). The GGBN Data Portal. GGBN Secretariat, NMNH, Washington D.C., USA. Compiled by GGBN Technical Management, BGBM, Be...") originally created as "Citation License"
